Succinyl-Coa Synthetase, Beta Chain

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-4   GLU-5  6.4 6.5 0.0 -6.3 145.8 145.7 -5.3
 GLU-5   TYR-6  5.6 5.9 3.6 0.6 85.3 81.3 28.4
 TYR-6   GLN-7  3.9 3.7 3.8 -3.9 126.8 123.5 1.2
 GLN-7   SER-8  1.5 1.3 2.1 5.4 71.2 68.9 49.1
 SER-8   LYS-9  2.8 3.5 -10.7 5.1 146.7 148.5 -19.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-19   GLN-20  2.7 2.4 6.3 -24.7 118.7 119.7 51.8
 GLN-20   ARG-21  1.4 1.1 -1.4 8.8 119.8 124.9 11.7
 ARG-21   PHE-22  5.1 4.5 -5.8 4.1 114.7 114.7 -20.8
 PHE-22   PHE-23  6.4 6.2 -1.2 4.7 140.6 138.6 11.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-106   GLU-107  7.3 7.3 2.0 -2.7 3.9 6.6 -5.0
 GLU-107   ALA-108  6.6 6.6 -20.8 19.1 104.1 113.3 -26.4
 ALA-108   LEU-109  6.4 6.8 25.5 -12.0 45.0 42.3 53.8
 LEU-109   ASP-110  3.5 4.3 11.0 -1.0 65.6 55.6 26.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees