Glutamate Receptor Subunit 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-109   GLY-110  7.0 7.0 11.0 -6.5 150.9 152.0 -6.4
 GLY-110   ILE-111  7.5 7.4 -5.4 2.4 48.8 51.5 20.5
 LEU-109   GLY-110  7.5 6.6 11.0 -6.5 97.2 99.3 32.5
 GLY-110   ILE-111  6.7 6.2 -5.4 2.4 16.7 6.7 27.2
 ILE-111   SER-112  6.6 6.7 6.7 -2.6 93.3 100.8 -0.1
 LEU-109   GLY-110  7.0 7.0 11.0 -6.5 150.9 152.0 -6.4
 GLY-110   ILE-111  7.5 7.4 -5.4 2.4 48.8 51.5 20.5
 LEU-109   GLY-110  7.5 6.6 11.0 -6.5 97.2 99.3 32.5
 GLY-110   ILE-111  6.7 6.2 -5.4 2.4 16.7 6.7 27.2
 ILE-111   SER-112  6.6 6.7 6.7 -2.6 93.3 100.8 -0.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-113   MET-114  2.2 2.4 -1.0 -0.5 112.4 110.3 -34.4
 MET-114   ILE-115  0.7 0.7 4.9 -6.3 35.9 34.4 -41.1
 ILE-115   LYS-116  2.9 2.5 10.9 -6.4 66.2 67.6 101.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-119   PRO-120  8.4 8.4 14.2 0.8 43.0 41.3 186.0
 PRO-120   ILE-121  11.2 11.0 7.0 -4.9 54.1 58.0 -68.8
 ILE-121   GLU-122  9.1 9.1 -4.6 5.7 147.8 155.0 32.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-190   LEU-191  4.0 4.1 -6.1 -2.2 8.8 9.5 123.0
 LEU-191   LEU-192  5.9 6.0 11.7 -15.8 102.8 105.8 20.7
 LEU-192   GLU-193  6.8 7.1 -4.6 8.7 14.5 18.9 -68.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees