Zinc-Alpha-2-Glycoprotein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-33   ASN-34  5.4 5.3 11.2 -6.2 90.3 89.0 54.8
 ASN-34   ASP-35  5.9 5.4 6.3 -6.5 19.3 23.4 -3.5
 ASP-35   LEU-36  6.5 5.8 5.3 -10.3 44.4 39.7 -40.8
 LEU-36   GLN-37  3.6 3.2 4.1 9.6 85.4 84.6 -8.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-174   LYS-175  5.6 5.6 1.2 -9.1 103.9 107.2 -1.6
 LYS-175   TYR-176  8.2 8.3 15.7 -14.5 33.6 38.8 -8.6
 TYR-176   SER-177  8.8 9.3 3.5 19.8 62.8 55.7 76.5
 SER-177   LYS-178  5.2 5.8 15.0 0.5 118.0 112.3 -12.2
 LYS-178   ASN-179  3.9 6.0 -14.4 -7.1 115.9 134.5 -73.1
 ASN-179   ILE-180  6.8 8.3 52.3 -56.1 36.9 38.5 -23.0
 ILE-180   LEU-181  4.9 5.2 -4.0 -11.4 76.3 74.2 56.1
 LEU-181   ASP-182  2.6 2.5 -3.7 -0.2 60.1 56.3 14.2
 ASP-182   ARG-183  5.6 5.4 -0.4 3.0 118.7 116.8 23.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-236   ASN-237  4.3 4.1 12.9 -3.1 51.0 47.4 67.4
 ASN-237   GLY-238  1.1 0.8 6.6 10.6 88.2 93.2 -10.1
 GLY-238   ASN-239  2.8 3.2 -10.6 -6.0 119.9 128.9 -123.4
 ASN-239   GLY-240  5.1 5.6 -8.5 23.0 162.8 154.2 77.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees