Glutamate Racemase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-137   ALA-138  4.4 4.1 -19.3 5.0 134.8 130.7 -41.4
 ALA-138   CYS-139  4.1 5.1 -17.1 -65.0 82.5 70.7 40.4
 CYS-139   PRO-140  5.7 7.6 -66.6 8.9 116.1 135.9 -166.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-164   LYS-165  7.3 8.0 -54.2 29.8 134.5 133.7 -55.2
 LYS-165   GLU-166  9.8 9.7 23.6 -9.0 64.1 89.3 1.4
 GLU-166   PHE-167  8.9 8.7 31.9 -53.6 57.9 67.5 -40.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-173   LEU-174  5.0 5.1 -4.6 19.6 153.0 148.7 49.8
 LEU-174   ILE-175  4.2 3.9 -15.2 13.6 134.8 133.4 3.9
 ILE-175   LEU-176  5.9 5.8 11.5 -1.8 57.9 54.3 20.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-181   PRO-182  13.7 11.1 -168.5 42.0 86.2 136.8 -832.6
 PRO-182   LEU-183  14.0 13.5 -32.8 0.7 126.7 105.4 931.7
 LEU-183   LEU-184  10.6 15.9 -69.6 -31.5 97.4 129.2 -144.8
 LEU-184   LYS-185  12.2 14.1 -166.9 17.2 141.6 149.4 -393.5
 LYS-185   LYS-186  11.1 13.0 -6.5 29.5 148.7 150.4 84.8
 LYS-186   GLU-187  13.2 15.0 -50.6 32.8 95.0 99.4 -38.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees