Diaminopimelate Epimerase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-119   LEU-120  4.9 4.9 3.2 0.8 72.8 73.1 49.3
 LEU-120   ALA-121  2.0 2.2 -1.4 -0.6 131.7 129.9 -22.3
 ALA-121   LYS-122  1.5 1.4 -5.8 12.2 121.6 123.1 47.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-271   GLY-272  4.3 4.2 -7.6 17.9 159.2 167.2 96.9
 GLY-272   PRO-273  4.1 3.8 -14.6 -2.1 123.7 123.9 -69.7
 PRO-273   ALA-274  2.0 1.8 -8.3 10.1 107.9 113.7 18.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees