Alcohol Dehydrogenase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-105   PRO-106  4.3 4.8 -12.5 13.1 137.8 149.3 10.2
 PRO-106   GLU-107  5.9 5.8 -32.3 37.2 130.9 114.2 8.3
 GLU-107   GLY-108  3.3 3.4 42.6 -49.5 76.3 83.4 80.8
 GLY-108   ASN-109  0.7 1.0 26.1 -27.5 142.1 146.3 25.6
 GLY-108   ASN-109  0.7 1.0 26.1 -27.5 142.1 146.3 25.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-108   ASN-109  0.7 1.0 26.1 -27.5 142.1 146.3 25.6
 GLY-108   ASN-109  0.7 1.0 26.1 -27.5 142.1 146.3 25.6
 ASN-109   PHE-110  2.8 3.4 -14.5 19.1 88.4 88.1 16.3
 PHE-110   CYS-111  6.0 6.4 3.5 -9.3 54.5 59.7 7.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-175   PHE-176  6.8 6.6 -2.5 -18.0 95.0 85.2 -24.9
 PHE-176   SER-177  3.9 3.6 23.8 -15.1 156.8 151.8 -113.0
 SER-177   THR-178  1.9 1.6 -6.0 -0.6 48.9 45.9 92.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-317   ILE-318  7.3 8.1 -36.4 -23.8 40.8 69.2 439.4
 ILE-318   PHE-319  6.7 6.9 -12.1 -9.4 59.0 57.7 23.4
 PHE-319   GLY-320  4.5 4.8 10.6 -12.1 86.5 85.6 64.7
 GLY-320   GLY-321  3.8 3.8 -5.1 -4.2 135.4 139.0 -137.0
 GLY-321   PHE-322  2.0 2.0 13.2 -13.5 102.0 104.1 68.1
 PHE-322   LYS-323  1.4 1.2 17.6 -21.8 60.5 66.5 -44.6
 LYS-323   SER-324  4.4 4.6 -30.3 28.7 31.6 34.3 98.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-363   SER-364  21.8 21.7 21.0 9.2 62.3 52.0 261.4
 SER-364   GLY-365  22.7 22.4 -20.3 12.9 91.4 84.8 -78.8
 GLY-365   GLU-366  19.4 20.1 38.3 -24.9 43.8 33.2 179.3
 GLU-366   SER-367  18.2 18.2 -87.1 31.4 106.3 89.9 -206.1
 SER-367   ILE-368  14.9 14.8 11.3 -6.1 147.0 153.2 -71.4
 ILE-368   ARG-369  12.3 12.5 -5.5 10.9 67.9 68.7 -21.3
 ARG-369   THR-370  10.4 10.2 -5.1 1.4 137.4 140.9 -57.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees