Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-519
THR-520
6.2
6.5
-16.1
4.1
41.4
37.9
31.5
THR-520
LEU-521
3.8
4.9
-20.5
19.0
118.2
112.3
-2.8
LEU-521
GLY-522
1.6
2.5
-7.9
-8.1
40.8
43.0
42.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-742
LEU-743
12.4
12.3
7.1
-1.2
71.5
72.1
15.2
LEU-743
ILE-744
9.0
9.0
-2.1
9.3
161.8
150.4
30.1
ILE-744
ASP-745
9.3
9.3
-23.0
18.4
128.7
133.8
-16.2
ASP-745
SER-746
5.7
5.8
9.9
-2.3
121.9
114.1
-2.8
SER-746
LYS-747
3.1
3.2
-1.5
10.9
108.1
98.9
29.9
LYS-747
GLY-748
1.1
1.4
-17.5
3.9
37.7
43.0
31.9
GLY-748
TYR-749
4.2
4.5
-8.6
4.4
70.7
70.4
5.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees