Glutamate 5-Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-102   LEU-103  6.8 6.7 4.9 -6.6 70.7 71.9 64.3
 LEU-103   THR-104  4.6 4.6 3.2 -3.1 50.0 49.0 -67.1
 THR-104   ARG-105  5.8 5.7 3.3 -2.0 55.5 56.4 71.8
 ARG-105   ALA-106  5.4 5.3 5.9 2.1 55.9 56.1 73.7
 ARG-105   ALA-106  5.4 5.3 5.9 2.1 55.9 56.1 73.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-105   ALA-106  5.4 5.3 5.9 2.1 55.9 56.1 73.7
 ARG-105   ALA-106  5.4 5.3 5.9 2.1 55.9 56.1 73.7
 ALA-106   ASP-107  6.6 6.5 -16.9 14.3 109.9 106.3 -90.3
 ASP-107   MET-108  3.3 3.2 4.4 -7.8 137.5 139.7 -39.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-153   ALA-154  9.0 8.8 8.3 -1.0 53.2 51.5 90.7
 ALA-154   LEU-155  6.8 6.7 -2.7 4.2 59.2 58.1 -30.9
 LEU-155   ALA-156  4.0 3.9 -1.8 -1.3 50.1 49.3 53.1
 ALA-156   ALA-157  6.9 6.7 -0.6 -4.3 62.4 64.8 59.5
 ALA-156   ALA-157  6.9 6.7 -0.6 -4.3 62.4 64.8 59.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-156   ALA-157  6.9 6.7 -0.6 -4.3 62.4 64.8 59.5
 ALA-156   ALA-157  6.9 6.7 -0.6 -4.3 62.4 64.8 59.5
 ALA-157   ILE-158  8.8 8.9 8.8 -4.3 94.6 96.6 -16.3
 ILE-158   LEU-159  7.0 7.0 -2.7 2.7 152.1 150.8 37.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-262   GLU-263  8.2 8.2 1.3 -18.7 139.0 132.9 360.3
 GLU-263   ASN-264  11.2 11.3 16.3 -11.5 159.4 162.7 -284.0
 ASN-264   ARG-265  11.0 11.2 -1.2 -19.8 58.4 51.2 161.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-269   PHE-270  6.0 6.0 1.6 -6.0 104.6 105.0 -114.2
 PHE-270   GLY-271  2.6 2.5 9.4 11.6 40.8 35.8 476.0
 GLY-271   ALA-272  2.6 2.5 -24.7 9.6 118.0 110.3 -265.3
 ALA-272   PRO-273  6.2 6.2 9.2 -6.7 105.7 105.6 -117.3
 PRO-273   PRO-274  9.0 9.0 -16.8 23.1 72.9 74.4 49.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees