IgG1 Fab Fragment (Anti-Lysozyme Antibody D1.3, Kappa) 3 - Lysozyme (E.C.3.2.1.17)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  SER-115   SER-116  4.2 4.0 12.5 0.5 12.7 23.8 48.8  SER-116   ALA-117  4.3 3.1 -20.2 26.9 96.6 85.9 -3.2  ALA-117   SER-118  3.4 2.5 -21.8 38.6 114.4 100.5 21.0 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees