Pyruvate Carboxylase N-Terminal Domain

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-130   PRO-131  3.9 4.8 22.5 -8.4 51.7 47.5 24.5
 PRO-131   GLY-132  1.5 1.5 -18.5 8.8 70.1 77.7 8.5
 GLY-132   SER-133  2.4 3.4 -2.8 14.7 143.7 153.9 12.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-202   GLU-203  3.4 2.6 31.7 16.1 14.9 5.0 90.9
 GLU-203   ASN-204  3.2 2.1 147.1 -173.8 60.7 57.9 -38.2
 ASN-204   PRO-205  5.7 5.6 13.1 -28.5 131.6 125.7 24.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees