N-Acylamino Acid Racemase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-137   GLU-138  7.5 7.3 2.6 -3.7 85.6 86.7 4.0
 GLU-138   VAL-139  4.4 4.2 2.6 10.2 56.7 59.9 65.0
 VAL-139   GLY-140  1.9 1.8 -1.4 0.1 100.2 107.0 28.2
 GLY-140   VAL-141  2.2 2.1 -14.9 8.0 92.4 88.9 19.1
 VAL-141   SER-142  5.9 5.9 12.3 -15.5 23.6 24.5 34.7
 SER-142   LEU-143  7.9 8.2 -10.4 6.8 74.8 83.4 -66.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-163   TYR-164  5.8 5.7 -8.1 -2.2 42.2 35.6 51.6
 TYR-164   ARG-165  4.0 4.1 12.5 -15.8 127.9 120.4 -26.7
 ARG-165   ARG-166  4.0 4.4 2.1 -0.3 165.0 168.6 15.8
 ARG-166   ILE-167  4.3 4.4 4.6 -4.7 92.6 94.7 -47.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-206   ARG-207  13.5 13.6 16.4 -16.1 21.0 30.6 -54.9
 ARG-207   LEU-208  14.4 14.5 -9.9 27.8 138.3 135.5 134.2
 LEU-208   ARG-209  11.2 11.2 -25.0 5.5 91.7 96.5 29.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-211   ASP-212  13.0 13.3 0.5 -4.0 101.5 100.9 81.1
 ASP-212   GLU-213  12.9 13.5 -3.8 -11.7 45.2 49.0 152.2
 GLU-213   TYR-214  16.1 16.8 48.0 -34.4 165.5 165.2 -101.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-217   TYR-218  7.0 7.3 -11.4 5.8 36.4 38.6 76.5
 TYR-218   ILE-219  4.6 4.8 -2.0 4.3 79.7 80.5 18.2
 ILE-219   GLU-220  4.3 4.4 -2.5 10.3 81.3 77.7 -26.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees