Rab Guanine Nucleotide Exchange Factor Sec2
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-99
GLU-100
5.7
6.0
32.4
1.3
119.0
110.1
-48.7
GLU-100
VAL-101
3.9
3.8
-29.6
-7.8
57.2
42.6
87.7
VAL-101
GLU-102
0.8
0.6
12.2
1.2
154.1
134.5
-32.7
GLU-102
ASP-103
3.5
4.1
-13.2
-16.5
55.4
44.5
56.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees