Hypothetical Upf0122 Protein Sav1236

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-27   ARG-28  3.2 3.9 -0.7 -1.8 66.6 66.0 -2.1
 ARG-28   ASN-29  2.5 2.4 -4.9 1.1 29.5 30.9 22.7
 ASN-29   TYR-30  1.4 1.6 -5.2 -4.7 94.0 95.5 1.4
 TYR-30   LEU-31  2.7 3.3 7.5 5.5 76.7 65.2 21.5
 LEU-31   GLU-32  3.2 2.8 -10.1 5.8 45.1 47.8 3.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-61   THR-62  7.0 6.9 3.4 -1.0 89.4 84.6 21.4
 THR-62   GLY-63  3.4 3.5 -1.1 2.9 70.9 73.5 3.1
 GLY-63   ASP-64  5.0 5.1 -2.4 -0.6 1.6 6.9 14.2
 ASP-64   LEU-65  5.3 5.2 -6.3 4.4 68.8 72.8 17.5
 LEU-65   VAL-66  1.7 1.5 -3.0 1.3 90.5 94.6 7.2
 VAL-66   GLU-67  3.2 2.8 -5.8 2.6 42.4 46.3 24.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees