Abc Transporter Periplasmic Peptide-Binding Protein
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-265
ALA-266
20.3
20.4
-15.6
-11.3
84.4
81.5
1.2
ALA-266
HIS-267
17.3
17.4
-32.1
55.9
153.2
150.4
46.1
HIS-267
PRO-268
14.6
14.7
-22.1
26.4
147.6
150.7
38.3
PRO-268
SER-269
15.7
16.3
-51.5
45.9
117.2
139.9
20.3
SER-269
SER-270
13.2
15.6
-28.7
10.3
119.9
125.8
-16.9
SER-270
ALA-271
11.7
12.8
-8.1
2.8
146.5
146.1
-2.2
ALA-271
GLN-272
13.4
14.7
38.6
-66.8
104.4
94.7
15.5
GLN-272
LEU-273
16.8
17.5
42.5
20.7
106.6
119.5
-79.7
LEU-273
SER-274
16.6
16.0
-18.4
-23.6
132.0
121.5
-70.7
SER-274
ILE-275
16.6
17.3
20.1
-12.1
87.0
90.5
5.2
ILE-275
LEU-276
20.3
20.6
2.0
-1.1
130.4
146.7
10.0
LEU-276
ALA-277
21.5
20.9
88.6
-135.0
87.6
92.0
5.6
ALA-277
GLN-278
20.5
20.0
48.8
54.0
89.0
64.3
102.1
GLN-278
ARG-279
23.7
23.0
-123.2
-105.1
128.2
58.7
-58.3
ARG-279
ASP-280
25.7
25.4
36.8
17.6
134.6
134.6
-90.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-285
ARG-286
14.6
15.5
-2.0
-7.2
102.2
111.8
1.4
ARG-286
GLU-287
10.9
12.1
-39.4
19.2
49.1
54.6
7.8
GLU-287
THR-288
8.4
9.9
22.7
2.2
83.1
83.9
-15.0
THR-288
ASN-289
4.7
6.7
24.2
-76.6
150.9
139.3
109.7
ASN-289
LEU-290
3.3
3.9
-9.3
-5.2
74.9
92.1
9.6
LEU-290
ASN-291
0.5
0.4
18.0
3.3
77.3
75.8
29.1
ASN-291
ILE-292
3.6
3.1
-6.4
4.0
139.6
133.8
-2.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-504
HIS-505
4.1
4.1
5.8
-3.6
26.4
27.7
4.8
HIS-505
GLY-506
1.8
1.6
-8.3
-19.8
75.4
71.7
23.8
GLY-506
MET-507
3.9
3.6
33.4
1.2
73.4
58.8
52.8
MET-507
ARG-508
5.3
6.1
-20.3
52.6
118.6
118.4
54.0
ARG-508
PHE-509
8.6
8.5
-22.7
13.1
80.1
73.7
7.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees