D-Lactate Dehydrogenase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-99
PRO-100
9.8
9.8
-6.8
12.0
80.2
84.3
9.1
PRO-100
VAL-101
10.6
10.8
1.8
-0.1
100.2
103.3
18.3
VAL-101
TYR-102
7.5
7.7
-83.0
80.6
71.2
62.7
15.2
TYR-102
SER-103
4.3
5.1
-9.0
4.7
73.8
75.2
8.9
SER-103
PRO-104
5.1
5.7
-9.1
5.2
73.8
74.2
38.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-302
THR-303
2.4
2.4
-7.6
4.4
63.0
61.1
26.2
THR-303
HIS-304
3.0
2.4
-3.4
-1.4
6.3
11.3
27.9
HIS-304
ALA-305
2.8
2.2
4.1
-1.5
100.8
101.1
-23.9
ALA-305
VAL-306
1.4
2.2
2.5
-5.8
81.9
82.9
32.9
VAL-306
ARG-307
2.9
3.2
3.3
0.6
131.4
133.8
-3.9
ARG-307
ASN-308
4.3
4.0
-7.4
4.6
37.5
41.5
4.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees