Vitamin D Hydroxylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-160   ARG-161  11.3 13.2 -1.4 -23.7 44.0 40.8 75.4
 ARG-161   ASP-162  10.7 12.4 9.6 -2.1 88.4 101.6 -15.1
 ASP-162   ASP-163  13.3 14.8 -9.9 2.7 131.7 127.4 -17.7
 ASP-163   PHE-164  11.7 13.5 27.0 1.9 110.8 105.5 -70.2
 PHE-164   SER-165  8.3 10.0 -30.7 -3.2 28.8 41.0 131.9
 SER-165   ALA-166  10.0 11.2 10.3 5.0 78.1 74.0 9.6
 ALA-166   TRP-167  12.8 14.0 -5.2 -0.9 108.5 110.6 -31.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-188   GLY-189  4.4 3.8 -7.3 7.4 49.5 45.9 4.6
 GLY-189   TYR-190  4.1 4.1 5.9 -6.6 66.0 71.3 14.3
 TYR-190   LEU-191  4.6 5.7 3.6 10.0 74.5 72.2 -1.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-231   LEU-232  3.7 3.2 8.5 -12.3 153.9 143.4 18.9
 LEU-232   LEU-233  5.9 5.7 6.7 3.6 139.6 151.1 -55.0
 LEU-233   LEU-234  3.5 3.5 13.5 -20.5 97.4 105.3 24.9
 LEU-234   ILE-235  1.5 2.6 6.2 -7.8 119.7 110.3 -0.7
 ILE-235   ALA-236  5.1 6.3 -3.4 -8.8 12.1 25.3 54.4
 ALA-236   GLY-237  4.6 6.7 4.2 -28.4 120.8 138.2 79.9
 GLY-237   HIS-238  2.0 3.5 14.3 8.8 99.6 103.4 -3.4
 HIS-238   GLU-239  5.8 5.4 -60.1 78.2 123.0 126.6 47.1
 HIS-238   GLU-239  5.8 5.4 -60.1 78.2 123.0 126.6 47.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-238   GLU-239  5.8 5.4 -60.1 78.2 123.0 126.6 47.1
 HIS-238   GLU-239  5.8 5.4 -60.1 78.2 123.0 126.6 47.1
 GLU-239   THR-240  7.8 8.8 -50.6 58.7 146.4 152.3 13.4
 THR-240   THR-241  6.8 8.1 23.6 -13.3 32.2 42.2 43.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees