Glutamate Receptor Ionotropic, Nmda 2A
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-134
GLY-135
4.4
4.9
7.1
2.2
31.4
33.0
52.3
GLY-135
ILE-136
1.6
2.2
12.3
-15.0
107.3
108.8
5.5
ILE-136
SER-137
2.3
1.9
9.9
-10.7
116.4
114.8
53.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-232
THR-233
9.3
8.5
21.8
8.2
154.8
164.9
-235.8
THR-233
ILE-234
7.5
7.2
-17.9
-2.1
54.9
61.8
14.5
ILE-234
GLY-235
9.2
9.9
-22.8
138.3
91.1
65.3
-196.5
TYR-238
ILE-239
8.9
7.7
145.5
-78.9
90.2
98.7
-58.7
ILE-239
PHE-240
5.2
4.5
-11.4
-0.3
15.6
9.7
90.4
PHE-240
ALA-241
3.5
3.2
1.2
-2.9
97.2
104.6
-0.6
ALA-241
THR-242
1.2
1.6
10.1
-1.3
47.3
49.3
30.6
THR-242
THR-243
4.2
4.7
-1.8
-1.4
76.7
73.5
22.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees