Phosphoenolpyruvate Carboxykinase, Cytosolic [Gtp]

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-282   ALA-283  7.8 7.9 -2.2 3.1 114.1 114.7 51.0
 ALA-283   PHE-284  10.5 10.5 -7.9 2.5 124.3 124.3 15.1
 PHE-284   PRO-285  12.2 12.3 5.8 -4.8 70.6 81.5 323.8
 PRO-285   SER-286  15.3 15.7 4.2 4.0 122.8 126.2 -177.5
 SER-286   ALA-287  18.5 19.0 -2.2 13.8 93.5 107.1 -110.4
 ALA-287   CYS-288  19.1 19.6 -31.6 2.3 99.8 94.2 -149.3
 CYS-288   GLY-289  15.6 15.9 -1.0 4.0 29.5 31.6 373.8
 GLY-289   LYS-290  15.4 15.4 0.2 4.8 120.3 124.0 28.9
 LYS-290   THR-291  13.7 13.5 8.5 -1.0 174.8 163.9 -302.1
 THR-291   ASN-292  15.4 15.4 -3.9 2.5 67.7 69.5 -79.0
 ASN-292   LEU-293  15.0 15.0 -3.7 -3.3 81.8 78.0 74.8
 LEU-293   ALA-294  11.2 11.2 -1.3 3.1 37.0 37.7 -12.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-437   PRO-438  13.7 13.7 2.7 -5.4 87.0 88.1 55.8
 PRO-438   ALA-439  16.7 16.7 -1.1 -2.9 121.6 119.6 -115.4
 ALA-439   GLY-440  14.8 14.9 -2.1 3.2 94.3 96.0 45.1
 GLY-440   VAL-441  11.7 11.8 3.5 -1.8 132.4 132.0 -5.0
 VAL-441   PRO-442  9.5 9.6 -0.9 1.0 38.2 38.0 -28.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-512   HIS-513  0.3 0.4 -3.1 2.3 115.9 117.1 -21.7
 HIS-513   VAL-514  3.5 3.5 -4.8 3.9 76.3 78.3 18.1
 VAL-514   ASN-515  6.9 6.9 1.7 3.5 57.6 57.7 85.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-517   ARG-518  15.8 15.8 -7.5 2.2 29.5 34.0 166.2
 ARG-518   LYS-519  15.7 15.8 -0.6 -1.1 92.1 93.3 -35.2
 LYS-519   ASP-520  19.3 19.4 -5.4 -2.4 49.3 49.5 286.2
 ASP-520   LYS-521  21.5 21.5 -1.3 9.8 40.8 43.0 -396.2
 LYS-521   ASN-522  23.3 23.5 -7.8 -4.2 102.1 103.2 130.2
 ASN-522   GLY-523  26.2 26.3 7.0 -3.9 60.6 58.4 41.0
 GLY-523   LYS-524  24.1 24.2 4.0 -7.9 6.2 4.7 -232.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-534   ARG-535  10.0 10.0 -0.3 -0.1 68.4 67.8 -33.9
 ARG-535   VAL-536  11.4 11.4 2.1 -2.8 133.7 134.9 10.3
 VAL-536   LEU-537  8.8 8.8 -2.8 1.2 118.8 118.2 12.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-547   ASP-548  13.3 13.4 3.4 3.7 12.2 16.1 239.1
 ASP-548   SER-549  15.3 15.3 11.5 -7.5 72.2 76.1 70.5
 SER-549   ALA-550  13.7 13.6 -4.0 2.4 146.0 147.5 -8.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-551   LEU-552  12.9 12.9 -4.6 -0.1 50.3 50.8 112.5
 LEU-552   THR-553  11.2 11.2 -3.1 3.5 46.0 42.5 85.9
 THR-553   PRO-554  9.3 9.3 2.9 -1.0 123.3 122.0 -8.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-555   GLY-556  3.9 3.9 2.6 -5.8 148.8 150.5 102.2
 GLY-556   TYR-557  5.3 5.3 -5.8 7.0 62.1 61.2 -63.0
 TYR-557   VAL-558  7.7 7.7 -0.6 -1.7 68.4 69.6 18.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-569   GLY-570  21.8 21.7 121.2 2.7 119.9 128.3 -2500.5
 GLY-570   ASP-571  23.9 24.9 83.1 -1.8 102.4 148.3 2988.9
 ASP-571   VAL-572  24.8 24.8 -21.6 11.9 59.5 58.5 -23.6
 VAL-572   ASN-573  21.4 21.4 3.5 -1.2 152.6 154.4 32.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees