Response Regulator Fixj

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-148   GLN-149  2.9 3.1 9.4 -5.5 52.2 50.0 31.7
 GLN-149   VAL-150  0.5 0.8 -8.0 5.3 58.2 59.9 11.0
 VAL-150   MET-151  2.6 2.5 -5.4 -3.0 67.3 72.6 -7.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-180   VAL-181  3.7 3.4 1.3 -3.2 105.5 105.6 21.6
 VAL-181   MET-182  0.6 0.6 1.4 6.2 37.6 40.0 35.7
 MET-182   THR-183  1.8 2.0 -5.2 -2.5 135.1 136.0 -12.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees