Oligo-Peptide Binding Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  TYR-245   ASN-246  11.0 11.4 7.7 -10.0 84.3 80.7 0.2  ASN-246   ASN-247  7.3 7.7 9.7 -2.9 71.5 80.1 53.2  ASN-247   MET-248  6.8 7.7 -1.4 -1.7 168.5 168.1 -25.8  MET-248   PRO-249  5.4 6.3 12.0 -16.7 59.7 54.7 13.0  PRO-249   ILE-250  6.6 7.8 13.5 -17.3 68.3 59.9 18.7  ILE-250   GLU-251  5.0 7.0 19.2 1.5 16.8 12.6 83.9  GLU-251   LEU-252  5.2 7.8 13.5 -57.0 77.5 71.5 -56.4  LEU-252   PHE-253  4.8 5.6 30.6 -13.9 105.3 115.5 -72.2  PHE-253   GLN-254  2.3 2.8 2.4 -2.9 53.6 57.9 -32.4  GLN-254   LYS-255  0.9 0.2 3.8 -5.7 45.0 49.5 12.9 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  PRO-268   TYR-269  5.9 5.6 -0.9 -9.1 58.5 61.1 10.6  TYR-269   LEU-270  2.8 2.4 -7.2 -11.8 43.0 49.4 46.6  LEU-270   CYS-271  1.6 1.4 4.2 2.2 85.2 91.0 40.7  CYS-271   THR-272  2.8 3.0 8.7 -9.2 68.3 68.5 -7.4 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  TYR-484   TYR-485  6.3 6.4 2.8 -0.9 133.1 132.4 8.6  TYR-485   VAL-486  3.0 3.1 0.0 -0.3 99.4 99.6 24.9  VAL-486   ASN-487  2.7 1.8 6.4 3.1 93.2 92.6 19.8  ASN-487   ALA-488  3.5 2.9 -1.3 -2.7 29.2 22.9 25.2  ALA-488   ARG-489  4.4 3.8 0.5 -3.8 103.2 100.4 -33.2 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees