5'-Nucleotidase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-353   ASN-354  9.2 9.3 -15.2 29.8 86.0 83.6 -6.0
 ASN-354   LYS-355  5.7 5.9 -35.3 -7.7 100.2 113.7 -11.2
 LYS-355   GLY-356  5.8 6.2 -153.2 -126.4 138.8 171.0 76.4
 GLY-356   LYS-357  3.5 6.4 -68.8 -14.6 110.4 103.3 -17.2
 LYS-357   ALA-358  1.8 3.7 -2.5 9.3 108.2 85.2 5.4
 ALA-358   GLN-359  2.4 1.6 7.0 -10.3 26.4 37.2 -0.6
 GLN-359   LEU-360  3.0 4.0 27.2 -6.0 37.9 30.0 21.1
 LEU-360   GLU-361  0.2 1.3 11.8 7.7 76.4 89.5 8.0
 GLU-361   VAL-362  3.9 3.3 -4.6 -12.4 103.6 106.1 5.3
 VAL-362   LYS-363  5.9 6.0 -0.9 3.6 164.1 163.1 1.8
 LYS-363   ILE-364  8.1 8.3 -10.9 15.5 123.2 118.2 -0.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees