Endo-Beta-N-Acetylglucosaminidase F2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-924   PRO-925  10.5 10.3 -11.1 -6.1 65.8 62.8 17.9
 PRO-925   ASN-926  7.3 7.3 2.4 7.8 46.7 47.7 66.2
 ASN-926   ALA-927  4.1 4.0 -6.2 9.3 135.6 135.2 8.5
 ALA-927   ASP-928  7.0 6.8 -4.4 9.8 104.4 108.5 50.0
 ASP-928   THR-929  6.7 6.4 -20.2 30.7 49.8 47.9 -97.5
 ASP-928   THR-929  6.7 6.4 -20.2 30.7 49.8 47.9 -97.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-928   THR-929  6.7 6.4 -20.2 30.7 49.8 47.9 -97.5
 ASP-928   THR-929  6.7 6.4 -20.2 30.7 49.8 47.9 -97.5
 THR-929   ILE-930  3.5 3.2 -14.3 4.6 25.2 27.7 141.1
 ILE-930   MET-931  4.2 4.1 -10.9 6.2 54.9 57.9 68.9
 MET-931   LYS-932  7.1 7.1 -10.1 6.8 105.2 106.0 4.5
 MET-931   LYS-932  7.1 7.1 -10.1 6.8 105.2 106.0 4.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-931   LYS-932  7.1 7.1 -10.1 6.8 105.2 106.0 4.5
 MET-931   LYS-932  7.1 7.1 -10.1 6.8 105.2 106.0 4.5
 LYS-932   THR-933  6.3 6.5 11.8 5.3 28.2 32.8 140.4
 THR-933   VAL-934  3.7 3.9 -18.9 30.5 140.6 140.3 163.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-947   SER-948  10.5 10.3 -13.9 3.0 28.7 26.6 149.9
 SER-948   GLN-949  8.6 8.6 3.7 7.8 81.1 83.0 78.3
 GLN-949   LYS-950  6.4 6.1 -5.5 2.7 99.7 105.9 -92.7
 LYS-950   MET-951  3.4 3.4 -11.0 16.5 160.3 167.1 103.9
 MET-951   LEU-952  4.6 4.8 -6.0 -2.6 124.5 120.9 -109.3
 LEU-952   ASP-953  4.7 4.7 6.2 -3.7 96.4 96.4 37.1
 ASP-953   GLU-954  3.0 2.7 -5.1 2.9 120.6 125.5 49.3
 GLU-954   LEU-955  0.8 0.7 -6.3 4.2 164.4 164.2 -49.8
 LEU-955   LYS-956  1.4 1.3 3.5 2.9 79.8 80.5 69.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-984   ASP-985  2.6 2.8 2.0 5.2 68.6 63.1 58.4
 ASP-985   CYS-986  6.0 6.0 -17.2 9.6 154.9 145.7 -81.2
 CYS-986   ILE-987  4.5 4.5 1.3 19.3 93.3 100.1 4.4
 ILE-987   GLU-988  5.2 5.3 -15.3 6.9 72.2 85.9 14.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees