Nickel Responsive Regulator

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-40   ALA-41  2.9 3.2 -7.5 17.6 99.3 96.1 18.1
 ALA-41   GLN-42  6.0 6.3 -15.8 20.0 67.9 81.4 2.2
 GLN-42   GLU-43  5.7 5.9 5.9 5.5 58.5 36.1 49.3
 GLU-43   ALA-44  4.6 4.5 13.3 -29.7 22.7 36.4 -69.7
 ALA-44   THR-45  5.3 6.7 -176.4 -11.0 91.1 80.7 200.1
 THR-45   GLN-46  8.8 9.7 -69.8 -13.9 105.5 79.1 344.1
 HIS-48   GLY-49  16.3 15.5 87.6 -111.6 62.6 58.3 -44.5
 GLY-49   THR-50  17.6 17.6 23.7 -19.6 127.8 127.1 -23.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees