Orotidine 5'-Phosphate Decarboxylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-58   LYS-59  10.3 10.4 -5.0 -0.2 83.5 84.9 16.3
 LYS-59   THR-60  8.5 8.5 4.8 0.0 24.6 26.0 43.4
 THR-60   HIS-61  7.0 7.1 -1.1 2.8 93.4 90.7 31.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-64   LEU-65  9.6 10.2 -16.2 -2.6 31.5 26.2 148.7
 LEU-65   THR-66  8.0 8.3 -23.2 16.8 37.6 38.4 33.7
 THR-66   ASP-67  8.7 9.0 -14.7 13.6 56.5 58.1 9.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-90   ASP-91  3.2 3.2 -3.5 1.3 51.3 52.2 -6.9
 ASP-91   ARG-92  6.1 6.0 6.8 -4.7 71.9 68.2 36.0
 ARG-92   ARG-93  6.5 6.3 -2.0 2.8 48.9 49.8 -16.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-114   TRP-115  7.8 7.5 -5.5 8.9 88.7 90.4 -3.4
 TRP-115   ALA-116  6.4 6.2 -0.6 12.4 136.4 138.6 116.0
 ALA-116   ASP-117  4.1 4.0 1.3 -6.9 25.1 31.1 -66.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-118   THR-119  3.1 3.2 0.1 2.2 65.0 65.2 5.1
 THR-119   ASN-120  1.0 1.0 8.0 -15.2 144.6 145.5 41.3
 ASN-120   ALA-121  4.0 3.9 -2.4 9.2 90.7 94.7 23.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-126   PRO-127  13.6 14.0 9.7 -13.5 96.6 90.9 7.1
 PRO-127   GLY-128  11.5 11.8 -6.6 -1.9 40.7 43.0 55.6
 GLY-128   ILE-129  13.4 13.6 21.9 -17.0 138.9 146.4 -64.9
 ILE-129   VAL-130  10.5 11.0 -5.6 6.7 82.4 87.6 0.4
 ILE-129   VAL-130  10.5 11.0 -5.6 6.7 82.4 87.6 0.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-129   VAL-130  10.5 11.0 -5.6 6.7 82.4 87.6 0.4
 ILE-129   VAL-130  10.5 11.0 -5.6 6.7 82.4 87.6 0.4
 VAL-130   SER-131  8.3 8.3 22.8 -18.4 77.9 79.5 20.6
 SER-131   GLY-132  11.4 11.4 -1.4 3.4 163.7 165.7 15.4
 GLY-132   LEU-133  12.3 12.3 11.8 -11.6 53.2 54.8 -13.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-145   GLY-146  7.2 6.9 6.1 9.9 32.3 30.0 145.4
 GLY-146   LEU-147  4.3 4.2 -23.5 14.2 79.3 81.3 24.5
 LEU-147   LEU-148  1.2 1.2 -1.5 -2.3 128.1 127.2 -26.2
 LEU-148   MET-149  2.5 2.6 5.6 -8.1 81.9 84.0 -27.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-166   GLY-167  11.1 11.6 -12.0 6.3 67.3 68.9 35.9
 GLY-167   THR-168  11.7 12.0 2.5 1.6 133.3 132.0 -14.4
 THR-168   VAL-169  9.4 9.7 -9.4 4.1 113.9 114.6 -24.1
 VAL-169   ASP-170  6.6 7.0 11.6 -5.2 68.4 66.4 -20.8
 ASP-170   ILE-171  7.3 7.6 -2.3 -0.6 41.8 48.3 -0.7
 ILE-171   ALA-172  7.7 7.7 10.1 -10.3 103.6 100.3 1.8
 ILE-171   ALA-172  7.7 7.7 10.1 -10.3 103.6 100.3 1.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-171   ALA-172  7.7 7.7 10.1 -10.3 103.6 100.3 1.8
 ILE-171   ALA-172  7.7 7.7 10.1 -10.3 103.6 100.3 1.8
 ALA-172   LYS-173  4.0 3.9 13.5 -1.1 49.7 46.6 95.0
 LYS-173   SER-174  3.8 4.0 -1.5 2.4 85.2 80.8 -74.8
 SER-174   ASP-175  7.3 7.2 -3.1 2.2 64.8 67.8 -2.2
 ASP-175   LYS-176  6.7 6.6 2.7 1.0 99.9 90.5 28.6
 LYS-176   ASP-177  5.2 5.3 -1.2 -7.1 45.9 45.6 58.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees