Benzoylformate Decarboxylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-452   MET-453  3.1 3.1 2.5 -1.0 76.7 75.2 -76.0
 MET-453   ASN-454  0.6 0.7 5.4 1.0 36.6 36.7 58.1
 ASN-454   ASN-455  3.5 3.6 -0.8 -1.6 116.3 118.6 -7.2
 ASN-455   GLY-456  4.7 4.8 3.0 4.4 30.3 28.1 127.0
 GLY-456   THR-457  5.3 5.4 -5.6 -2.8 147.6 147.8 -143.1
 THR-457   TYR-458  2.6 2.7 3.4 -3.2 98.6 97.8 43.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-476   ASP-477  1.1 1.2 -1.6 3.8 145.4 144.8 7.3
 ASP-477   VAL-478  4.1 4.3 -0.5 -0.3 108.8 111.1 -18.5
 VAL-478   PRO-479  5.8 6.0 -0.9 0.2 129.1 129.0 -37.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees