Glutamate Dehydrogenase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PRO-6
PHE-7
24.3
24.2
-17.5
4.5
97.9
101.5
-65.1
PHE-7
GLU-8
23.3
23.3
7.1
-2.2
24.8
19.8
191.6
GLU-8
MET-9
23.0
23.2
-4.3
4.1
91.2
90.5
-105.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ARG-16
ALA-17
11.8
11.7
-5.0
11.8
109.5
106.3
106.0
ALA-17
ALA-18
8.9
8.8
-2.5
-7.6
73.9
66.9
272.0
ALA-18
GLN-19
9.5
9.5
25.7
-19.5
141.7
146.6
-279.1
GLN-19
TYR-20
7.5
7.4
-11.2
2.6
103.7
103.3
97.9
TYR-20
MET-21
4.2
4.1
-5.0
0.9
114.7
111.9
-36.7
MET-21
ASP-22
5.8
5.7
-8.3
7.4
59.1
58.6
-28.5
ASP-22
ILE-23
9.0
8.9
0.9
11.9
53.8
51.2
230.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-94
ALA-95
9.3
9.3
4.5
-5.9
63.9
62.3
-46.8
ALA-95
VAL-96
8.1
8.0
12.6
-5.7
80.3
77.5
112.9
VAL-96
VAL-97
4.8
4.9
4.4
-10.7
143.3
139.3
105.0
VAL-97
ASP-98
3.7
3.6
16.4
-14.7
109.2
110.0
-8.6
ASP-98
LEU-99
5.8
5.8
-17.6
24.0
33.9
33.9
-144.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-184
LEU-185
9.1
9.3
-5.2
-4.0
81.8
85.0
-75.2
LEU-185
GLY-186
7.7
8.1
15.2
-12.4
17.1
18.0
100.9
GLY-186
ARG-187
8.6
8.5
-5.5
4.3
128.4
134.0
1.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-192
GLN-193
13.7
13.7
0.2
-1.4
83.3
85.3
16.0
GLN-193
GLY-194
10.9
10.9
-7.3
2.0
39.6
39.4
135.2
GLY-194
ALA-195
8.7
8.5
-0.5
8.2
40.9
40.0
-181.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-196
PHE-197
12.8
12.7
-5.7
9.0
102.6
102.0
45.9
PHE-197
THR-198
9.8
9.9
-2.9
2.6
172.3
173.4
13.0
THR-198
ILE-199
9.6
9.7
-10.9
12.3
109.8
110.0
82.1
ILE-199
ARG-200
13.4
13.4
-1.4
5.2
97.6
98.8
57.6
ILE-199
ARG-200
13.4
13.4
-1.4
5.2
97.6
98.8
57.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-199
ARG-200
13.4
13.4
-1.4
5.2
97.6
98.8
57.6
ILE-199
ARG-200
13.4
13.4
-1.4
5.2
97.6
98.8
57.6
ARG-200
GLU-201
13.7
13.6
-16.9
9.2
50.7
47.5
132.5
GLU-201
ALA-202
11.5
11.5
15.4
-6.9
156.8
159.8
-246.0
ALA-202
ALA-203
12.8
12.8
-25.9
17.2
93.0
96.0
-76.9
ALA-202
ALA-203
12.8
12.8
-25.9
17.2
93.0
96.0
-76.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-202
ALA-203
12.8
12.8
-25.9
17.2
93.0
96.0
-76.9
ALA-202
ALA-203
12.8
12.8
-25.9
17.2
93.0
96.0
-76.9
ALA-203
LYS-204
16.3
16.4
4.1
-0.8
83.2
90.0
-58.6
LYS-204
ALA-205
15.6
15.7
-10.8
8.5
164.4
159.4
-108.0
ALA-205
LEU-206
14.2
14.3
7.4
1.1
125.5
126.8
-119.6
ALA-205
LEU-206
14.2
14.3
7.4
1.1
125.5
126.8
-119.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-205
LEU-206
14.2
14.3
7.4
1.1
125.5
126.8
-119.6
ALA-205
LEU-206
14.2
14.3
7.4
1.1
125.5
126.8
-119.6
LEU-206
GLY-207
17.2
17.1
-7.6
1.2
105.7
102.8
37.5
GLY-207
ILE-208
19.9
19.9
-27.7
38.2
124.5
123.2
209.9
ILE-208
ASP-209
20.9
21.0
-7.4
15.3
169.1
167.5
472.6
ASP-209
LEU-210
22.0
22.5
-131.9
138.0
106.4
133.7
-108.7
LEU-210
LYS-211
21.2
21.7
-28.2
2.3
137.8
149.1
-496.3
LYS-211
GLY-212
23.4
23.3
-6.2
5.4
71.7
84.6
35.7
GLY-212
LYS-213
26.5
26.2
-18.5
17.8
34.7
38.4
-50.5
LYS-213
LYS-214
25.3
25.5
5.8
2.5
76.8
80.7
-121.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-227
ALA-228
17.7
17.7
6.6
0.5
84.8
86.4
107.5
ALA-228
LYS-229
21.1
21.1
0.0
0.9
33.0
36.9
-37.0
LYS-229
LEU-230
20.3
20.2
-5.5
-0.9
88.2
85.4
54.0
LEU-230
ALA-231
17.1
17.1
-3.5
12.6
48.9
43.3
-36.9
ALA-231
LYS-232
18.7
18.7
-7.4
4.6
64.4
65.9
80.5
ALA-231
LYS-232
18.7
18.7
-7.4
4.6
64.4
65.9
80.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-231
LYS-232
18.7
18.7
-7.4
4.6
64.4
65.9
80.5
ALA-231
LYS-232
18.7
18.7
-7.4
4.6
64.4
65.9
80.5
LYS-232
GLU-233
21.6
21.5
-34.3
11.2
45.2
49.4
275.0
GLU-233
GLN-234
19.8
20.1
25.4
-14.7
77.0
83.3
-64.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-286
LEU-287
28.7
28.6
15.4
-6.5
64.6
57.8
-75.5
LEU-287
GLU-288
29.1
29.0
-11.8
1.5
75.9
78.7
68.7
GLU-288
VAL-289
28.5
28.4
2.3
10.2
33.6
28.0
247.9
VAL-289
ASP-290
25.7
26.0
28.3
-20.1
74.4
73.6
321.4
VAL-289
ASP-290
25.7
26.0
28.3
-20.1
74.4
73.6
321.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-289
ASP-290
25.7
26.0
28.3
-20.1
74.4
73.6
321.4
VAL-289
ASP-290
25.7
26.0
28.3
-20.1
74.4
73.6
321.4
ASP-290
VAL-291
22.8
23.1
-12.1
15.7
87.8
90.6
-0.1
VAL-291
LEU-292
20.5
20.6
-2.0
-0.8
88.7
87.8
43.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-348
THR-349
10.3
10.2
-2.1
9.9
107.9
111.5
152.3
THR-349
VAL-350
6.7
6.6
-12.2
11.6
179.0
174.8
-13.7
VAL-350
SER-351
7.3
7.3
9.0
-16.0
71.6
74.0
-9.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ARG-370
GLU-371
4.6
4.7
15.8
2.4
54.8
61.2
514.4
GLU-371
LYS-372
4.6
4.6
-10.8
4.6
134.1
135.8
-184.1
LYS-372
LEU-373
1.6
1.5
6.4
-5.6
41.6
40.1
21.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-378
LYS-379
5.6
5.7
-0.1
-8.3
43.7
42.6
183.0
LYS-379
ALA-380
4.3
4.3
2.2
11.5
138.6
135.9
-329.8
ALA-380
PHE-381
1.5
1.4
-13.9
3.0
52.0
48.5
255.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TRP-382
GLU-383
6.1
6.0
1.3
-4.4
44.3
40.9
-118.7
GLU-383
VAL-384
3.4
3.4
4.0
2.8
43.7
43.7
149.6
VAL-384
TYR-385
2.9
2.9
-5.7
9.0
121.6
121.0
119.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-400
VAL-401
6.7
6.7
0.6
1.3
106.3
109.3
62.6
VAL-401
VAL-402
4.4
4.4
10.2
-5.8
37.2
39.2
50.1
VAL-402
ALA-403
3.6
3.5
-13.5
12.9
118.0
116.3
-36.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees