Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-16
VAL-17
5.6
5.5
-3.1
-7.0
75.1
76.8
20.0
VAL-17
MET-18
8.8
8.7
-5.2
10.0
129.9
130.5
32.1
MET-18
TYR-19
11.5
11.4
18.4
-11.5
94.1
95.0
-0.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-32
GLU-33
13.0
13.2
2.4
-11.6
118.5
115.1
21.6
GLU-33
GLY-34
10.1
10.1
-6.5
8.1
93.6
91.9
-22.0
GLY-34
TYR-35
6.5
6.4
7.8
-4.6
61.0
60.5
-12.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ARG-227
ASP-228
3.4
3.2
-5.0
1.1
102.9
104.4
16.8
ASP-228
LYS-229
7.1
6.9
10.1
-3.8
49.7
55.4
8.9
LYS-229
ILE-230
8.6
8.2
-2.4
11.6
158.6
163.1
84.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees