Periplasmic Murein Peptide-Binding Protein
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-357
LYS-358
17.7
18.2
-5.3
-4.8
67.0
67.2
43.2
LYS-358
LEU-359
15.2
16.0
-23.3
-7.9
131.7
120.5
-91.1
LEU-359
THR-360
11.6
12.2
12.5
-24.5
104.5
125.6
58.5
THR-360
LEU-361
8.9
9.1
-8.7
37.1
95.4
102.8
14.7
LEU-361
LEU-362
5.2
5.6
-8.8
-1.5
85.6
88.9
63.3
LEU-362
TYR-363
2.9
3.4
1.6
-14.0
107.0
96.2
-2.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
HIS-369
GLN-370
4.5
4.4
2.1
-0.6
65.2
57.8
18.5
GLN-370
LYS-371
1.8
1.9
3.1
4.9
52.3
53.9
5.6
LYS-371
ILE-372
3.6
3.5
-5.1
-1.3
58.2
62.0
-0.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-379
TRP-380
13.2
12.6
-0.1
9.5
125.1
124.7
8.8
TRP-380
LYS-381
13.9
13.5
4.3
-12.8
115.6
121.6
25.0
LYS-381
LYS-382
14.6
14.5
4.9
-8.4
117.4
120.0
6.3
LYS-382
ASN-383
16.5
16.2
9.4
-6.8
60.5
58.6
27.0
ASN-383
LEU-384
18.7
17.9
-6.9
20.0
134.3
137.7
29.1
LEU-384
GLY-385
19.0
18.4
-8.5
2.0
84.3
77.2
-5.1
GLY-385
VAL-386
18.4
18.8
1.3
-31.0
49.4
57.3
-90.6
VAL-386
ASP-387
15.6
16.6
4.0
6.5
120.9
113.8
-12.8
ASP-387
VAL-388
13.6
14.3
-34.5
21.6
133.7
137.5
-60.9
VAL-388
LYS-389
10.2
11.3
-9.1
17.5
71.7
66.9
37.2
LYS-389
LEU-390
9.7
10.0
33.3
-21.4
74.4
74.5
50.8
LEU-390
GLN-391
6.2
6.6
0.5
-2.2
69.2
71.2
51.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-399
ASP-400
7.4
7.1
-12.9
25.6
39.7
43.5
-27.2
ASP-400
SER-401
7.8
7.9
-2.0
-8.8
102.5
91.1
-6.5
SER-401
ARG-402
6.8
5.9
-4.9
8.5
80.1
70.0
-25.1
ARG-402
ASN-403
3.0
2.5
-29.9
24.2
20.1
5.5
34.4
ASN-403
THR-404
3.1
3.5
-52.0
10.8
70.8
60.5
66.5
THR-404
GLY-405
6.0
5.1
6.0
-4.7
94.0
76.0
25.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees