Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-108
LEU-109
3.7
3.8
-13.8
7.7
48.5
51.3
15.7
LEU-109
GLY-110
0.2
0.5
11.4
0.7
56.0
58.3
24.6
GLY-110
ILE-111
3.6
3.5
-12.9
-5.2
47.5
48.4
49.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-215
ASP-216
9.1
9.2
0.8
-5.9
145.5
149.1
3.3
ASP-216
CYS-217
6.2
6.2
-2.3
-7.5
99.7
103.3
31.4
CYS-217
LYS-218
2.4
2.5
11.7
-20.8
93.2
110.5
42.6
LYS-218
GLY-219
2.4
2.3
13.7
3.6
68.0
56.3
18.4
GLY-219
TYR-220
4.6
4.8
12.5
-5.4
71.6
73.2
32.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees