Nad-Dependent Deacetylase Sirtuin-3, Mitochondrial

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-151   SER-152  9.4 9.5 17.8 3.1 69.2 73.6 58.7
 SER-152   GLY-153  6.3 6.4 -2.7 13.2 125.2 131.6 41.6
 GLY-153   ILE-154  5.0 5.3 -1.5 -11.4 69.2 67.7 38.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-202   ASN-203  8.9 8.4 22.9 -25.4 133.8 138.6 19.8
 ASN-203   TYR-204  6.0 5.4 -13.0 14.2 84.3 85.9 34.3
 TYR-204   LYS-205  4.5 3.7 0.5 -10.6 65.0 61.9 -43.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-246   ALA-247  0.7 0.9 -5.3 -9.7 69.4 66.0 26.7
 ALA-247   HIS-248  3.3 2.8 14.6 -6.1 65.7 63.4 -4.5
 HIS-248   GLY-249  5.5 5.1 7.9 -14.3 73.2 69.8 -14.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-298   PRO-299  7.7 7.1 8.2 -3.9 80.7 68.7 12.0
 PRO-299   GLN-300  5.8 5.9 17.1 -8.0 25.3 30.8 66.9
 GLN-300   ARG-301  5.2 5.2 5.0 -3.2 92.1 88.9 39.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees