Phosphoglycerate Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-122   PHE-123  3.2 3.0 -4.5 -2.1 103.4 102.9 -97.8
 PHE-123   HIS-124  4.5 4.6 18.9 -18.6 59.8 64.5 15.1
 HIS-124   VAL-125  2.8 3.1 6.6 -7.7 39.8 39.4 0.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-142   PRO-143  9.0 9.6 8.8 2.2 55.9 54.2 174.7
 PRO-143   ALA-144  11.2 11.9 2.7 -3.0 38.5 36.7 9.2
 ALA-144   LYS-145  13.3 13.7 -2.1 0.6 139.1 135.6 -30.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-161   ASN-162  14.1 14.3 2.2 0.4 46.6 47.5 31.6
 ASN-162   ASP-163  14.2 14.3 4.3 -4.9 103.5 104.2 -22.6
 ASP-163   ALA-164  15.2 15.2 -15.0 31.3 132.7 129.3 217.9
 ALA-164   PHE-165  14.2 14.0 6.4 -9.4 37.0 47.4 -41.7
 PHE-165   GLY-166  17.4 17.5 -7.2 0.1 146.3 141.1 -86.1
 GLY-166   THR-167  16.4 16.6 0.0 -2.1 129.9 134.9 -11.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-175   VAL-176  11.5 11.3 13.8 -15.4 97.4 103.2 40.8
 VAL-176   GLY-177  13.4 13.3 10.6 -4.8 82.8 91.7 8.3
 GLY-177   VAL-178  12.0 12.0 -18.0 23.2 154.7 148.8 103.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-186   PHE-187  17.6 18.0 -5.4 -4.1 83.3 81.8 93.2
 PHE-187   LEU-188  20.2 20.5 -8.7 11.8 133.8 130.6 71.2
 LEU-188   MET-189  19.9 20.1 3.3 -3.0 38.5 32.0 -7.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-406   LEU-407  22.8 22.7 -3.9 5.7 103.2 105.4 -9.7
 LEU-407   PRO-408  19.8 19.7 -7.5 -2.8 106.8 103.1 -57.3
 PRO-408   GLY-409  17.3 17.4 11.9 14.1 12.3 15.3 447.4
 GLY-409   VAL-410  16.3 16.3 3.0 -28.2 56.4 51.0 -268.0
 VAL-410   ASP-411  19.8 19.7 12.8 -3.0 97.2 108.5 -29.0
 ASP-411   ALA-412  21.1 21.1 7.7 -10.5 60.7 74.1 26.6
 ALA-412   LEU-413  18.8 18.6 17.1 -5.1 15.8 16.2 196.3
 LEU-413   SER-414  20.0 19.9 0.7 6.3 80.6 83.3 0.7
 SER-414   ASN-415  22.7 22.2 -8.9 3.6 92.8 90.8 -16.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees