Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-109
ILE-110
4.7
5.0
12.1
1.0
64.5
57.7
60.7
ILE-110
SER-111
6.0
6.3
0.6
5.5
61.1
58.0
33.3
SER-111
ILE-112
8.7
8.8
-1.6
2.6
120.7
121.9
7.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-140
SER-141
10.2
9.6
10.5
6.0
43.1
47.0
104.7
SER-141
THR-142
7.2
6.6
5.5
-8.8
97.7
99.1
-55.5
THR-142
MET-143
7.7
7.6
1.7
-11.1
64.4
66.1
-67.0
MET-143
THR-144
11.3
11.1
4.4
3.8
5.6
7.1
69.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-190
SER-191
3.3
3.4
-6.0
-0.5
38.8
41.5
45.6
SER-191
THR-192
4.0
4.5
-1.7
2.4
44.9
46.8
12.9
THR-192
SER-193
2.1
2.6
7.4
-5.3
134.6
134.8
-17.5
SER-193
ILE-194
1.4
1.2
4.2
1.5
123.9
125.0
-20.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-211
ASP-212
9.9
10.6
10.3
8.2
39.8
35.3
209.3
ASP-212
SER-213
7.3
7.8
-0.7
5.0
66.1
70.5
-35.9
SER-213
LYS-214
6.1
6.3
11.4
-7.7
63.8
67.8
53.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TRP-250
TRP-251
8.5
8.7
6.0
0.8
83.2
83.0
-27.9
TRP-251
ARG-252
5.9
6.1
1.6
7.4
32.1
31.1
84.8
ARG-252
GLY-253
7.8
7.2
168.6
-127.6
44.1
59.5
196.6
GLY-253
ASN-254
5.9
4.0
24.9
-4.8
60.8
27.2
177.5
ASN-254
GLY-255
6.5
3.8
-1.9
21.1
62.8
84.4
-52.1
GLY-255
CYS-256
6.5
6.2
-61.1
-1.5
124.7
103.4
-188.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees