Cmp-N-Acetylneuraminate-Beta-Galactosamide-Alpha-2,3- Sialyltransferase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-242   GLY-243  14.2 14.2 2.5 -11.0 76.0 78.7 30.6
 GLY-243   ASP-244  16.4 16.5 -2.7 3.9 139.8 136.4 54.5
 ASP-244   GLU-245  17.2 17.2 2.6 -2.0 99.0 97.9 -45.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-294   SER-295  9.5 10.1 0.3 -3.6 63.3 61.4 3.2
 SER-295   PRO-296  8.8 9.3 -4.6 11.0 82.1 75.6 -156.8
 PRO-296   TYR-297  11.6 11.9 -9.4 8.4 51.7 49.3 79.7
 TYR-297   VAL-298  10.4 10.1 -5.9 -5.0 14.1 13.4 371.2
 VAL-298   ILE-299  10.6 10.1 5.9 -3.6 98.5 94.9 -84.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-303   LEU-304  4.8 4.7 -0.7 7.0 65.2 64.1 -136.6
 LEU-304   ARG-305  8.2 8.2 -11.1 6.7 16.5 20.3 200.9
 ARG-305   GLU-306  6.8 6.7 -1.3 1.4 85.8 88.7 -92.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-340   PRO-341  5.2 5.4 -1.0 3.2 73.8 75.3 -93.9
 PRO-341   ALA-342  8.9 9.0 -4.1 1.4 15.4 14.8 114.9
 ALA-342   SER-343  10.1 10.2 6.4 -8.6 106.7 104.1 -8.9
 SER-343   LEU-344  13.4 13.4 8.5 -6.3 95.8 97.5 -63.4
 LEU-344   PRO-345  12.3 12.3 -4.7 7.6 29.9 28.4 -23.7
 PRO-345   GLU-346  12.0 11.8 -1.6 -2.5 97.3 100.3 -106.6
 GLU-346   ASP-347  8.7 8.3 1.6 -1.7 72.2 75.6 71.0
 ASP-347   TYR-348  11.4 10.7 1.6 -2.1 29.9 34.5 47.0
 TYR-348   TRP-349  12.3 12.0 -0.3 1.9 118.9 122.1 76.6
 TRP-349   LEU-350  10.6 10.4 0.1 -2.1 139.1 138.1 70.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-354   ALA-355  6.4 6.5 1.1 0.0 86.4 84.8 -34.3
 ALA-355   LEU-356  8.9 9.2 1.3 -6.7 148.8 151.8 123.2
 LEU-356   PHE-357  10.5 10.7 6.6 -7.3 124.0 124.5 4.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees