Shikimate 5-Dehydrogenase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
HIS-20
ALA-21
8.2
8.3
-0.2
0.7
24.3
26.2
-8.2
ALA-21
PHE-22
9.4
9.5
2.5
-1.1
116.2
113.3
17.9
PHE-22
ALA-23
6.0
6.1
-1.1
0.8
112.4
113.2
16.2
ALA-23
LEU-24
7.3
7.2
-1.2
-1.1
62.4
64.0
3.8
LEU-24
GLU-25
10.7
10.7
1.3
9.5
156.8
156.6
-131.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-105
GLU-106
6.2
6.1
8.1
-0.5
150.2
151.4
-101.0
GLU-106
ALA-107
6.7
6.5
-8.5
2.9
48.8
52.7
69.8
ALA-107
LEU-108
6.3
6.2
5.0
-3.9
82.4
79.0
14.4
LEU-108
LYS-109
9.7
9.4
7.9
-11.8
112.0
111.8
27.0
LYS-109
ALA-110
11.3
11.0
5.9
-0.5
174.5
173.8
-66.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-229
PRO-230
7.4
7.5
-1.3
-1.6
80.7
77.7
43.1
PRO-230
MET-231
5.6
5.6
-3.4
2.3
45.0
44.1
-6.3
MET-231
LEU-232
4.0
4.2
-4.1
5.8
107.7
107.9
-3.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-247
PRO-248
9.5
9.7
-12.9
7.2
30.8
32.3
94.3
PRO-248
ASP-249
7.0
7.3
9.3
-11.3
85.2
85.1
-29.2
ASP-249
PRO-250
5.6
5.5
2.3
-3.7
63.9
65.9
-27.3
PRO-250
SER-251
3.4
3.1
-12.6
6.2
56.8
56.6
83.4
SER-251
GLY-252
4.3
4.2
8.2
-1.6
128.8
134.9
-89.2
GLY-252
MET-253
1.6
1.6
-11.1
1.9
118.7
110.6
-42.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees