Trap Periplasmic Solute Binding Protein
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-104
VAL-105
8.3
8.9
-2.1
6.6
88.8
77.3
50.6
VAL-105
PHE-106
4.7
5.4
-12.3
7.9
27.4
28.2
22.6
PHE-106
THR-107
4.2
4.7
3.4
-7.7
114.9
114.4
4.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PRO-109
TYR-110
6.0
5.9
5.0
-4.4
105.7
105.8
16.7
TYR-110
VAL-111
5.5
5.2
14.6
-18.7
127.2
128.6
17.0
VAL-111
PHE-112
2.7
2.1
-7.7
15.2
121.3
117.9
31.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASP-149
SER-150
5.6
5.9
-6.1
5.3
70.9
80.0
2.4
SER-150
GLY-151
3.7
4.3
-11.4
-10.4
92.9
90.1
6.3
GLY-151
THR-152
0.3
0.8
2.1
14.2
33.3
35.9
57.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-236
ILE-237
5.0
5.1
2.1
7.3
51.7
53.9
44.2
ILE-237
THR-238
1.4
1.6
2.2
-9.2
110.3
108.2
35.5
THR-238
PRO-239
3.7
4.3
7.8
-0.9
47.1
47.8
1.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-278
ASN-279
1.9
2.0
-0.6
2.1
114.8
115.8
34.1
ASN-279
GLN-280
1.1
0.8
-10.9
22.8
61.9
61.1
-35.4
GLN-280
GLU-281
4.2
3.5
-9.2
-8.6
33.5
41.5
41.9
GLU-281
ALA-282
2.7
2.7
11.3
-4.2
75.7
72.5
14.0
ALA-282
LEU-283
4.3
4.7
0.4
-1.3
80.7
80.6
0.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLN-317
ALA-318
3.0
3.8
-22.8
1.9
100.7
106.5
-22.8
ALA-318
LEU-319
6.6
7.4
14.7
-11.8
10.8
5.6
34.1
LYS-321
ALA-322
6.3
7.0
-1.3
-6.0
128.0
129.6
-23.1
ALA-322
ILE-323
9.0
9.5
1.0
-2.4
24.5
18.0
0.6
ILE-323
ALA-324
7.1
7.5
2.7
9.5
86.8
81.6
6.2
ALA-324
ASP-325
7.8
7.9
-0.2
3.2
82.4
93.4
5.7
ASP-325
VAL-326
11.1
11.5
7.0
-24.6
44.4
31.6
-88.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees