Alanine Dehydrogenase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-125
ALA-126
7.3
7.6
-4.9
7.9
16.2
15.9
-10.3
ALA-126
LEU-127
5.7
5.9
-3.7
-2.2
59.2
60.9
-6.4
LEU-127
PRO-128
4.8
5.3
-5.2
0.9
56.4
55.4
19.8
PRO-128
LEU-129
1.2
1.7
7.5
-9.1
157.3
155.3
28.8
LEU-129
LEU-130
2.3
2.6
-5.0
9.7
50.9
47.7
-43.4
LEU-130
ALA-131
4.5
5.1
-6.4
2.3
82.9
77.0
40.2
ALA-131
PRO-132
4.5
5.0
-2.4
4.6
32.7
31.5
-37.8
PRO-132
MET-133
3.7
3.7
-5.8
-5.7
36.3
36.3
59.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-307
THR-308
5.6
5.8
14.8
-20.8
152.8
153.5
18.2
THR-308
SER-309
5.9
5.8
-5.9
-5.0
50.6
50.5
83.3
SER-309
THR-310
2.3
2.3
5.5
-2.6
109.5
105.9
-8.9
THR-310
TYR-311
4.0
3.7
0.8
-4.3
137.9
138.6
22.3
TYR-311
ALA-312
6.4
6.2
4.6
0.5
147.4
145.8
-50.2
ALA-312
LEU-313
4.4
4.3
-0.1
2.5
58.7
59.2
-3.4
LEU-313
THR-314
2.5
2.4
-0.7
1.8
64.3
62.9
-15.0
THR-314
ASN-315
6.2
6.1
-1.8
8.1
46.9
42.2
-8.9
ASN-315
ALA-316
7.2
6.7
-6.5
-3.7
29.2
29.4
47.4
ALA-316
THR-317
4.4
4.0
-0.3
0.2
74.9
78.4
17.6
THR-317
MET-318
6.3
6.0
-3.2
-16.8
74.1
74.0
54.6
MET-318
PRO-319
9.5
9.2
9.6
10.4
157.7
158.7
-78.9
PRO-319
TYR-320
10.0
9.7
-4.1
-3.8
72.8
71.0
31.5
TYR-320
VAL-321
9.7
9.5
10.2
-9.1
58.3
59.7
11.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees