Citrate Synthase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-217   ARG-218  17.1 17.4 -7.1 -6.6 33.1 38.8 18.7
 ARG-218   HIS-219  16.5 16.4 19.5 -25.9 94.0 98.2 -60.1
 HIS-219   GLY-220  13.4 13.4 -117.8 138.7 152.2 154.1 150.3
 GLY-220   GLY-221  11.7 10.9 26.9 -22.8 40.4 41.7 21.5
 GLY-221   ALA-222  14.5 13.5 -39.5 36.2 92.1 103.8 -120.9
 ALA-222   ASN-223  13.9 13.5 -17.6 11.2 140.2 147.6 -72.2
 ASN-223   GLU-224  11.4 11.1 5.7 14.8 42.9 44.2 158.6
 GLU-224   ALA-225  13.9 13.9 -18.3 1.0 75.6 75.7 -22.1
 ALA-225   VAL-226  16.7 16.5 4.3 -0.6 85.0 82.8 -8.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-314   SER-315  9.5 9.5 -6.6 -1.2 54.8 53.9 46.1
 SER-315   GLY-316  6.5 6.5 -1.2 4.4 26.2 31.7 -23.3
 GLY-316   VAL-317  8.8 8.9 -2.2 -3.7 43.0 38.0 66.9
 VAL-317   VAL-318  9.3 9.3 2.5 -0.9 111.1 111.7 -22.5
 VAL-318   TYR-319  5.7 5.7 4.9 -5.3 124.3 122.5 22.2
 TYR-319   SER-320  5.0 5.0 -6.9 -2.8 26.5 26.4 109.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees