Anthrax Protective Antigen

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-156   LYS-157  11.4 11.2 12.1 -11.0 42.4 45.6 20.4
 LYS-157   GLN-158  10.9 10.8 -8.6 4.7 70.2 69.5 -3.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-187   GLU-188  1.8 2.5 -1.8 1.3 41.4 43.1 19.3
 GLU-188   VAL-189  1.6 2.0 11.2 -19.4 70.3 70.4 1.6
 VAL-189   GLU-190  4.5 4.6 4.9 -8.8 62.1 60.9 -30.7
 GLU-190   GLY-191  5.2 5.8 11.0 -14.6 59.4 58.8 -119.7
 GLU-190   GLY-191  5.2 5.8 11.0 -14.6 59.4 58.8 -119.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-190   GLY-191  5.2 5.8 11.0 -14.6 59.4 58.8 -119.7
 GLU-190   GLY-191  5.2 5.8 11.0 -14.6 59.4 58.8 -119.7
 GLY-191   TYR-192  6.4 6.8 11.8 0.2 92.1 96.9 33.8
 TYR-192   THR-193  6.8 7.7 -21.8 53.1 132.0 127.7 228.9
 THR-193   VAL-194  9.8 11.0 -20.3 11.0 103.6 120.3 -96.7
 VAL-194   ASP-195  11.6 11.8 -16.8 11.8 94.1 98.6 -4.8
 ASP-195   VAL-196  15.3 15.3 12.2 -16.3 67.5 56.3 -13.7
 VAL-196   LYS-197  17.3 17.4 16.3 -10.0 117.3 117.2 -8.5
 LYS-197   ASN-198  20.2 20.2 25.3 -12.7 44.0 42.4 137.7
 ASN-198   LYS-199  23.3 22.8 -25.7 20.7 125.8 131.7 44.0
 LYS-199   ARG-200  22.1 20.8 -43.1 83.8 87.4 67.9 -191.1
 ARG-200   THR-201  18.5 18.1 -31.7 22.5 87.0 96.7 -50.1
 THR-201   PHE-202  15.3 14.9 9.0 -0.8 146.1 159.0 -9.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-209   ILE-210  18.2 18.6 58.1 -42.9 59.5 70.2 44.7
 ILE-210   HIS-211  18.0 18.5 14.8 -26.5 4.6 2.8 -105.2
 HIS-211   GLU-212  16.5 17.3 21.4 -6.6 56.0 60.5 181.7
 GLU-212   LYS-213  18.2 19.4 1.0 25.4 106.1 102.4 -84.9
 GLU-212   LYS-213  18.2 19.4 1.0 25.4 106.1 102.4 -84.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-212   LYS-213  18.2 19.4 1.0 25.4 106.1 102.4 -84.9
 GLU-212   LYS-213  18.2 19.4 1.0 25.4 106.1 102.4 -84.9
 LYS-213   LYS-214  21.7 22.5 -34.4 3.2 62.2 38.7 248.6
 LYS-214   GLY-215  20.7 21.6 -3.7 4.3 16.7 17.8 -21.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-219   LYS-220  7.8 8.4 -12.7 19.0 53.4 54.9 -69.1
 LYS-220   SER-221  6.0 6.5 16.3 -7.0 41.4 44.7 118.7
 SER-221   SER-222  4.0 4.1 -6.8 10.9 64.4 64.1 -27.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-239   THR-240  7.6 8.0 22.3 -22.3 83.3 84.5 -33.0
 THR-240   GLY-241  10.0 10.3 -1.8 -5.5 32.8 30.5 141.7
 GLY-241   ARG-242  10.9 11.1 5.1 1.6 120.7 113.9 -60.6
 ARG-242   ILE-243  10.5 10.8 7.4 -9.0 134.7 132.1 -81.3
 ILE-243   ASP-244  8.5 8.6 -10.4 9.8 30.9 28.4 21.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees