Regulator Of Nonsense Transcripts 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-344   PHE-345  16.2 16.8 5.1 10.6 117.2 117.5 -164.9
 PHE-345   THR-346  14.0 14.4 3.4 3.7 41.4 43.7 52.8
 THR-346   LEU-347  13.6 14.0 4.9 -13.5 104.6 99.9 88.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-350   ASP-351  9.5 9.7 0.0 5.3 151.0 140.2 -87.1
 ASP-351   SER-352  8.6 8.3 76.2 -53.5 89.4 84.6 -4.0
 SER-352   ASP-353  6.0 5.9 21.8 -27.0 138.6 152.6 41.7
 ASP-353   MET-354  3.8 4.2 -19.7 -16.6 66.1 85.3 362.9
 ASP-353   MET-354  3.8 4.2 -19.7 -16.6 66.1 85.3 362.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-353   MET-354  3.8 4.2 -19.7 -16.6 66.1 85.3 362.9
 ASP-353   MET-354  3.8 4.2 -19.7 -16.6 66.1 85.3 362.9
 MET-354   ARG-355  1.4 1.4 34.4 -21.3 101.0 129.5 -153.3
 ARG-355   LEU-356  2.5 2.5 33.4 0.8 119.7 113.3 -156.6
 LEU-356   MET-357  4.7 4.5 4.0 -18.0 51.1 44.2 -146.6
 MET-357   GLN-358  7.3 7.0 -3.9 2.9 60.4 63.0 0.9
 GLN-358   GLY-359  11.0 10.5 2.8 1.3 97.4 78.1 -187.2
 GLY-359   ASP-360  11.9 10.6 43.9 -66.5 134.3 130.2 169.7
 GLY-359   ASP-360  11.9 10.6 43.9 -66.5 134.3 130.2 169.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-359   ASP-360  11.9 10.6 43.9 -66.5 134.3 130.2 169.7
 GLY-359   ASP-360  11.9 10.6 43.9 -66.5 134.3 130.2 169.7
 ASP-360   GLU-361  9.0 8.3 10.9 -25.9 158.6 154.4 154.8
 GLU-361   ILE-362  10.0 9.2 14.4 -9.8 123.6 131.3 -44.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-387   GLY-388  20.2 20.1 14.9 -10.3 29.3 13.0 65.5
 GLY-388   ASP-389  19.3 19.7 -83.7 53.0 103.5 116.8 -105.4
 ASP-389   GLU-390  16.0 16.1 33.9 -25.4 22.3 10.9 40.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-392   ILE-393  14.9 14.5 6.4 -11.6 94.5 83.6 -161.3
 ILE-393   GLU-394  14.3 13.9 -10.8 22.2 70.2 61.5 -2.0
 GLU-394   LEU-395  17.2 16.8 -0.2 7.3 51.9 43.6 53.1
 LEU-395   ARG-396  16.7 16.5 -13.8 -24.3 86.4 91.0 48.9
 ARG-396   SER-397  18.8 18.8 58.1 -31.3 139.3 152.3 -277.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-412   PHE-413  3.3 2.8 6.8 -6.8 32.3 28.3 -70.9
 PHE-413   VAL-414  3.6 3.3 -2.3 11.3 83.2 85.1 -14.9
 VAL-414   TRP-415  6.8 6.7 12.9 -14.7 35.3 38.8 -6.0
 TRP-415   LYS-416  8.0 8.0 -9.2 7.9 79.5 75.6 -73.7
 TRP-415   LYS-416  8.0 8.0 -9.2 7.9 79.5 75.6 -73.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-415   LYS-416  8.0 8.0 -9.2 7.9 79.5 75.6 -73.7
 TRP-415   LYS-416  8.0 8.0 -9.2 7.9 79.5 75.6 -73.7
 LYS-416   SER-417  11.2 10.9 1.2 -14.3 126.9 122.5 78.4
 SER-417   THR-418  13.6 13.5 4.8 -23.7 141.3 142.0 197.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-695   ILE-696  13.9 13.4 8.9 -20.5 27.8 28.4 -95.4
 ILE-696   ARG-697  12.7 11.7 -8.6 23.9 80.1 74.7 -162.7
 ARG-697   LEU-698  9.1 8.0 0.7 31.6 65.2 62.5 185.4
 LEU-698   GLN-699  6.1 6.0 -6.5 33.4 91.1 113.8 264.2
 GLN-699   VAL-700  2.8 3.5 -12.4 -10.8 99.8 92.2 -26.8
 VAL-700   GLN-701  2.2 2.6 30.6 -28.4 138.3 148.6 -26.0
 GLN-701   TYR-702  4.1 4.1 -7.2 6.7 110.0 105.3 -68.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees