Iron Binding Protein Fbpa

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-98   THR-99  5.1 5.2 5.4 1.2 13.9 16.0 23.3
 THR-99   THR-100  3.0 3.0 0.2 -6.6 93.4 93.4 28.9
 THR-100   ARG-101  1.0 1.5 -4.5 20.2 141.8 138.5 46.7
 ARG-101   ALA-102  2.9 3.2 -17.8 13.8 97.1 100.0 11.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-229   ASN-230  7.2 7.1 -5.6 28.2 153.0 154.1 79.1
 ASN-230   ILE-231  5.4 5.5 3.3 -5.6 91.3 89.5 12.7
 ILE-231   SER-232  1.9 1.9 6.7 -18.6 75.8 77.5 -13.4
 SER-232   GLY-233  3.5 2.6 14.3 -27.8 43.6 52.9 -68.8
 GLY-233   VAL-234  3.1 3.1 15.7 11.2 54.9 45.7 102.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-265   ASN-266  11.2 9.9 6.8 -7.4 102.7 99.9 9.8
 ASN-266   HIS-267  8.6 7.5 25.5 -8.1 58.6 54.7 36.6
 HIS-267   GLU-268  5.5 5.0 2.1 -14.7 129.2 120.7 4.7
 GLU-268   TYR-269  3.4 2.3 16.0 -15.9 84.2 78.9 -0.1
 TYR-269   PRO-270  2.9 3.0 22.2 1.5 142.7 141.6 -72.1
 PRO-270   VAL-271  6.0 6.1 -1.9 4.3 59.5 58.1 7.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-282   GLY-283  4.1 4.0 1.1 -0.8 38.8 34.3 2.6
 GLY-283   TRP-284  2.1 2.2 3.1 -0.7 100.1 96.1 -0.2
 TRP-284   GLY-285  3.0 2.9 -3.4 44.4 86.1 88.1 8.5
 GLY-285   THR-286  5.9 6.0 -21.3 -10.6 17.8 31.7 108.6
 THR-286   PHE-287  8.3 8.5 -18.8 -0.4 81.3 75.5 -37.1
 PHE-287   LYS-288  10.1 10.6 -0.3 -7.0 33.9 31.1 33.0
 LYS-288   SER-289  12.6 12.8 6.0 -3.3 140.5 136.5 -15.8
 SER-289   ASP-290  10.9 11.0 7.2 -4.0 130.5 133.6 -10.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees