Death-Associated Protein Kinase 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-9   GLU-10  19.4 18.9 17.3 -4.9 24.6 27.3 226.1
 GLU-10   ASP-11  20.8 20.1 -1.4 8.9 142.0 139.0 97.4
 ASP-11   PHE-12  20.5 19.4 -8.3 12.5 101.4 99.1 -81.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-26   VAL-27  22.0 22.4 -17.3 16.8 52.0 50.7 94.6
 VAL-27   LYS-28  19.1 19.5 5.9 -2.8 158.8 160.5 -28.5
 LYS-28   LYS-29  19.2 19.4 -2.8 1.4 59.0 59.8 102.4
 LYS-29   CYS-30  16.9 17.1 8.9 -8.8 126.0 124.9 -83.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-37   GLU-38  7.5 7.4 0.5 2.9 55.3 56.8 -18.1
 GLU-38   TYR-39  10.2 10.4 -0.4 8.4 169.3 169.1 87.8
 TYR-39   ALA-40  10.8 11.0 -17.5 28.7 113.8 111.3 -39.0
 ALA-40   ALA-41  13.5 13.8 16.7 -22.6 117.0 107.7 9.6
 ALA-40   ALA-41  13.5 13.8 16.7 -22.6 117.0 107.7 9.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-40   ALA-41  13.5 13.8 16.7 -22.6 117.0 107.7 9.6
 ALA-40   ALA-41  13.5 13.8 16.7 -22.6 117.0 107.7 9.6
 ALA-41   LYS-42  15.6 15.6 -19.9 14.4 38.3 42.0 -10.4
 LYS-42   PHE-43  16.8 17.0 -2.6 6.8 78.7 78.6 8.8
 PHE-43   ILE-44  20.0 20.0 -9.9 23.4 19.2 18.7 -160.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-93   GLU-94  9.6 10.0 0.8 9.9 48.0 48.3 88.4
 GLU-94   LEU-95  8.1 8.5 -11.1 10.4 94.3 96.8 -104.4
 LEU-95   VAL-96  11.3 11.7 5.8 -4.0 107.4 112.5 2.5
 VAL-96   SER-97  13.7 13.5 -30.3 25.9 94.6 101.4 100.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees