50S Ribosomal Protein L11

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-69   ILE-70  14.9 13.8 -21.8 41.3 119.7 114.9 -10.9
 LYS-71   THR-72  18.2 20.6 -7.0 -93.4 128.4 120.4 -257.3
 THR-72   PRO-73  21.3 22.3 -140.6 -59.9 137.4 73.7 -5.7
 PRO-73   PRO-74  23.1 26.2 149.5 -74.8 18.5 39.6 333.6
 PRO-74   ALA-75  23.4 29.0 60.7 -40.3 80.7 67.8 9.6
 ALA-75   SER-76  25.2 27.6 79.6 -86.1 67.6 24.3 -21.5
 SER-76   PHE-77  27.5 29.6 41.4 -31.8 130.6 98.1 -11.8
 PHE-77   LEU-78  29.1 33.0 22.7 -25.5 140.3 117.9 18.9
 LEU-78   LEU-79  29.0 33.2 29.5 -35.4 70.1 49.5 -30.0
 LEU-79   LYS-80  31.0 33.1 30.9 -41.3 91.6 61.0 -6.8
 LYS-80   LYS-81  33.2 35.8 39.6 -32.8 150.1 123.4 -9.7
 LYS-81   ALA-82  33.9 37.9 18.3 -18.5 97.2 85.1 7.2
 ALA-82   ALA-83  34.9 38.1 6.0 -16.8 58.9 31.8 -46.0
 ALA-83   GLY-84  37.2 38.9 19.6 -40.1 107.4 86.2 9.8
 ILE-85   GLU-86  38.7 38.4 4.5 -7.8 93.8 104.6 11.7
 GLU-86   LYS-87  37.7 37.3 84.6 -101.4 38.7 47.3 -56.6
 LYS-87   GLY-88  36.2 35.8 -29.6 53.2 129.7 141.4 77.3
 GLY-88   SER-89  35.3 35.1 19.8 -44.9 39.9 57.6 -87.3
 SER-89   SER-90  37.8 38.0 -2.6 39.1 121.4 130.0 104.5

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees