Trp Operon Repressor

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-63   GLY-64  22.1 27.2 -2.1 123.6 56.5 47.5 -106.9
 GLY-64   GLU-65  19.3 24.5 78.1 -34.6 141.5 74.0 -11.3
 GLU-65   MET-66  20.8 21.8 10.8 -19.4 79.3 80.0 -4.4
 MET-66   SER-67  22.2 19.6 -165.6 -15.9 95.5 35.1 98.9
 SER-67   GLN-68  18.9 16.7 -161.7 10.5 36.9 83.9 -156.6
 GLN-68   ARG-69  17.2 17.0 -10.6 10.6 59.5 132.5 -2.2
 ARG-69   GLU-70  20.3 14.4 -6.8 4.3 113.4 153.3 2.8
 GLU-70   LEU-71  20.5 16.0 -9.3 9.2 75.6 92.3 0.1
 LEU-71   LYS-72  17.0 19.5 10.9 -11.0 159.2 83.6 0.9
 LYS-72   ASN-73  17.5 18.5 -10.3 -18.3 84.7 155.0 336.2
 ASN-73   GLU-74  21.0 16.6 62.5 -83.3 65.7 40.0 4.0
 GLU-74   LEU-75  19.8 19.1 21.8 -74.5 130.3 92.8 -375.6
 LEU-75   GLY-76  17.5 22.6 54.8 117.1 136.2 123.6 261.1
 GLY-76   ALA-77  20.1 22.2 62.2 -11.5 77.5 156.6 -44.1
 ALA-77   GLY-78  22.8 22.9 141.5 -26.5 81.5 136.2 -46.2
 GLY-78   ILE-79  20.9 21.4 -134.8 14.5 30.9 35.7 136.0

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees