Adenylate Kinase Isoenzyme-2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-138   ARG-139  14.8 14.9 -5.4 3.3 98.2 101.0 10.8
 ARG-139   ILE-140  11.5 11.6 -2.0 2.1 160.7 159.8 13.4
 ILE-140   THR-141  11.7 11.7 5.7 1.9 73.4 71.9 24.0
 THR-141   GLY-142  13.2 13.2 -17.6 6.5 62.0 68.7 55.2
 GLY-142   ARG-143  11.7 11.8 26.0 -15.6 84.1 87.0 -46.5
 ARG-143   LEU-144  8.1 8.2 4.8 0.5 73.0 75.3 80.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-153   HIS-154  3.0 3.2 -4.6 0.6 92.7 92.3 -46.7
 HIS-154   GLU-155  6.4 6.6 2.5 0.5 20.3 20.3 79.2
 GLU-155   GLU-156  8.0 8.2 -1.3 -5.1 135.9 137.2 -92.2
 GLU-156   PHE-157  9.0 9.1 25.0 -19.4 95.3 91.9 -53.5
 GLU-156   PHE-157  9.0 9.1 25.0 -19.4 95.3 91.9 -53.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-156   PHE-157  9.0 9.1 25.0 -19.4 95.3 91.9 -53.5
 GLU-156   PHE-157  9.0 9.1 25.0 -19.4 95.3 91.9 -53.5
 PHE-157   ASN-158  7.5 7.3 -7.5 2.8 88.9 87.2 1.1
 ASN-158   PRO-159  3.7 3.5 -2.6 2.6 97.3 98.6 -15.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-174   ARG-175  9.5 9.4 -1.5 4.5 104.0 104.6 -112.2
 ARG-175   ARG-176  10.3 10.5 -0.5 -18.4 39.0 37.5 346.9
 ARG-176   SER-177  9.6 9.8 -2.5 6.9 90.8 96.5 -67.1
 SER-177   ASP-178  13.4 13.5 -23.3 19.2 25.4 39.0 44.3
 ASP-178   ASP-179  13.8 14.3 40.7 -13.0 78.0 75.6 213.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees