Mannitol Dehydrogenase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-87   LEU-88  12.7 12.7 2.3 -2.0 11.4 17.0 -57.8
 LEU-88   GLY-89  11.6 11.7 3.2 -2.5 61.6 62.1 44.1
 GLY-89   ASP-90  11.5 11.4 3.2 6.8 27.6 27.7 190.5
 ASP-90   THR-91  12.4 12.4 58.5 -19.0 85.7 88.6 82.9
 THR-91   ASP-92  14.9 15.6 153.1 -47.4 153.8 113.4 -2338.6
 ASP-92   ASP-93  16.0 18.4 -106.4 44.5 69.0 25.1 717.1
 ASP-93   THR-94  18.6 17.7 -67.5 19.0 43.8 54.2 982.0
 THR-94   GLU-95  16.8 16.5 -20.8 1.3 58.6 58.7 246.6
 GLU-95   VAL-96  18.3 18.2 -6.2 3.0 71.8 69.2 60.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-127   SER-128  1.4 1.5 0.6 0.6 25.3 25.3 92.5
 SER-128   LEU-129  1.8 2.0 -2.9 -1.0 118.1 117.2 -60.2
 LEU-129   THR-130  2.3 2.4 4.5 -3.5 2.9 0.7 77.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-133   GLY-134  9.9 9.9 0.1 0.8 61.9 61.4 17.0
 GLY-134   GLY-135  12.9 12.9 5.0 -3.0 19.2 22.1 26.8
 GLY-135   TYR-136  11.4 11.5 0.5 4.9 41.7 40.6 94.4
 TYR-136   CYS-137  12.6 12.7 -4.5 0.3 105.7 107.1 -79.5
 CYS-137   ILE-138  16.2 16.3 0.6 -5.7 83.8 78.9 -175.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-144   PHE-145  23.0 22.8 10.2 -14.7 83.2 88.1 54.7
 ALA-147   HIS-148  21.8 21.6 -24.4 41.2 83.9 78.4 -141.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-188   CYS-189  6.1 6.3 -3.6 4.0 143.5 143.9 -34.2
 CYS-189   ASP-190  4.6 4.8 -3.9 3.1 137.7 141.2 42.9
 ASP-190   ASN-191  5.6 5.7 -2.1 -0.8 126.1 122.6 -53.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-231   ILE-232  6.0 5.8 7.1 -6.4 66.9 65.5 -53.9
 ILE-232   THR-233  3.4 3.4 -0.9 1.2 76.8 76.5 64.3
 THR-233   PRO-234  3.9 3.9 7.1 -0.2 71.6 70.7 15.8
 THR-236   SER-237  11.4 11.4 47.5 -62.3 65.9 40.6 -262.4
 SER-237   THR-238  13.4 13.8 -18.6 -3.4 94.8 93.6 -31.9
 THR-238   ALA-239  16.9 17.3 2.8 4.6 50.4 48.5 80.6
 ALA-239   HIS-240  15.8 16.2 -4.5 -5.8 64.8 66.1 13.8
 HIS-240   ARG-241  13.8 14.5 2.2 3.4 124.4 127.4 -77.7
 ARG-241   LEU-242  16.8 17.4 -2.0 -1.0 122.2 123.0 -69.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-283   PHE-284  17.2 17.2 -14.7 17.6 47.7 48.4 -0.4
 PHE-284   THR-285  17.9 17.9 0.5 2.9 76.8 74.0 -6.6
 THR-285   ASP-286  19.8 19.9 -0.9 -17.2 49.9 48.3 286.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees