Transesterase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-109   ALA-110  4.2 4.3 8.6 0.1 58.2 56.8 61.1
 ALA-110   MET-111  2.3 2.3 -5.7 7.9 56.2 57.3 3.9
 MET-111   PRO-112  2.7 2.4 -1.9 -1.6 78.1 83.4 8.8
 PRO-112   VAL-113  3.9 3.8 5.1 -12.1 165.8 162.9 97.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-126   GLU-127  8.5 8.6 -0.3 2.9 86.6 90.4 22.8
 GLU-127   ARG-128  6.1 6.2 2.8 -2.8 40.4 39.8 9.0
 ARG-128   ARG-129  5.5 5.9 0.5 5.7 107.5 105.6 -6.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-143   LEU-144  3.1 3.3 -4.7 1.5 85.5 82.8 -15.3
 LEU-144   SER-145  0.6 0.4 -3.2 -3.4 19.7 20.5 48.5
 SER-145   TYR-146  2.8 2.7 -45.7 60.0 81.6 86.7 80.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-147   PHE-148  9.6 8.9 -15.9 7.3 153.2 144.5 -6.8
 PHE-148   LEU-149  10.5 10.2 -17.3 34.5 119.6 120.1 135.1
 LEU-149   HIS-150  7.8 7.3 41.0 -34.9 114.0 119.8 43.1
 HIS-150   PRO-151  8.2 8.3 -3.6 -1.4 72.5 73.0 -14.6
 PRO-151   LEU-152  11.9 12.1 -0.4 -1.4 12.6 10.5 37.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-160   TYR-161  19.1 19.0 -0.9 2.5 129.8 132.4 27.3
 TYR-161   LEU-162  15.9 15.7 -6.4 7.4 79.6 82.4 -3.4
 LEU-162   GLN-163  15.6 15.0 58.7 -73.1 99.0 94.5 -19.3
 ARG-173   LEU-174  10.8 11.6 -24.9 -1.6 141.2 122.9 -138.7
 LEU-174   ALA-175  9.8 9.4 16.8 2.8 57.5 54.0 127.5
 ALA-175   PRO-176  10.1 9.7 -2.8 0.3 79.8 79.5 -34.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-178   VAL-179  2.9 3.0 -5.4 6.8 102.4 103.6 50.6
 VAL-179   ASN-180  5.6 5.8 -2.0 -2.2 91.7 91.2 -21.8
 ASN-180   ASP-181  6.2 6.5 -4.3 5.2 53.8 54.6 7.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees