Sarcoplasmic/endoplasmic Reticulum Calcium Atpase 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-357   THR-358  10.2 10.1 3.5 3.6 11.9 20.6 10.6
 THR-358   ASN-359  8.8 9.1 -10.5 16.7 123.3 133.5 5.1
 ASN-359   GLN-360  7.4 6.6 -27.2 53.9 122.5 112.1 17.5
 GLN-360   MET-361  4.0 4.5 -14.9 -39.5 46.0 52.1 61.1
 MET-361   SER-362  1.0 1.0 13.4 -19.2 93.8 85.9 27.4
 SER-362   VAL-363  2.7 2.7 10.7 0.5 137.6 139.9 -14.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-598   MET-599  5.9 6.0 -4.9 17.4 53.2 57.9 -18.0
 MET-599   LEU-600  2.9 3.0 -27.2 79.4 106.0 110.4 29.6
 LEU-600   ASP-601  1.5 0.7 -17.8 -72.1 45.0 42.9 102.8
 ASP-601   PRO-602  4.2 4.0 -17.5 20.4 124.6 121.2 6.1
 PRO-602   PRO-603  5.6 6.9 -8.1 4.4 84.1 80.1 2.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees