Triosephosphate Isomerase (E.C.5.3.1.1)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-126   ILE-127  4.7 4.8 -10.7 14.8 103.3 99.5 111.8
 ILE-127   GLY-128  4.7 4.7 -0.9 3.4 46.7 49.5 -57.6
 GLY-128   GLU-129  8.0 7.9 5.9 12.4 64.8 70.1 164.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-145   GLN-146  9.7 9.5 7.7 -6.2 115.9 113.4 -61.1
 GLN-146   ILE-147  6.2 6.1 3.1 -4.9 82.7 84.9 -173.7
 ILE-147   ALA-148  5.0 4.7 -3.9 9.4 56.1 56.9 65.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-162   VAL-163  8.4 8.4 -5.3 6.7 24.3 24.8 -98.7
 VAL-163   ILE-164  7.0 7.0 -10.1 21.0 103.6 101.4 96.4
 ILE-164   ALA-165  3.3 3.4 -8.0 4.9 59.7 64.8 -72.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-167   PRO-168  8.5 8.6 -20.5 23.3 103.8 82.2 9.9
 PRO-168   VAL-169  10.9 11.0 30.6 6.2 123.9 121.8 -636.6
 VAL-169   TRP-170  13.2 13.5 -0.7 -2.9 110.3 118.4 -328.2
 TRP-170   ALA-171  15.7 16.3 -9.3 33.6 127.6 120.2 343.8
 ALA-171   ILE-172  16.3 15.1 0.8 0.2 114.0 121.3 -57.6
 ILE-172   GLY-173  17.0 16.3 10.8 -15.1 122.5 99.8 -195.2
 GLY-173   THR-174  20.7 19.8 16.3 -19.5 83.1 66.9 45.3
 THR-174   GLY-175  21.4 21.1 -6.0 15.2 144.1 168.3 50.6
 GLY-175   LYS-176  23.0 20.6 -23.4 14.9 132.1 119.2 -550.9
 LYS-176   VAL-177  20.1 18.5 -73.8 56.8 115.8 96.0 -129.8
 VAL-177   ALA-178  17.7 15.0 18.3 16.0 75.4 67.9 320.4
 ALA-178   THR-179  14.0 12.6 24.9 19.6 24.6 17.6 1213.7
 THR-179   PRO-180  12.5 11.7 -2.9 -2.4 85.4 87.7 -73.8
 PRO-180   GLN-181  9.0 8.2 16.5 -21.7 87.6 89.2 54.8
 GLN-181   GLN-182  8.3 8.2 10.8 -8.2 152.4 156.1 -249.3
 GLN-182   ALA-183  9.7 9.5 4.1 -13.6 127.9 126.8 488.4
 ALA-183   GLN-184  7.1 6.6 -3.0 -0.8 100.9 102.0 -106.4
 GLN-184   GLU-185  4.4 4.0 2.7 -5.8 110.0 110.9 137.6
 GLU-185   ALA-186  7.0 6.7 -6.0 14.3 12.6 12.9 -259.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees