Atp Synthase Subunit Beta

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-129   GLN-130  3.1 3.2 -50.6 22.3 37.3 52.1 114.9
 GLN-130   GLU-131  1.7 1.4 -41.9 27.3 84.9 88.2 -27.3
 GLU-131   ILE-132  5.0 5.0 -53.5 65.2 42.4 39.9 -9.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-149   GLY-150  4.0 4.4 17.4 8.7 73.8 83.2 31.4
 GLY-150   LYS-151  1.7 1.1 0.9 1.4 6.5 18.5 4.6
 LYS-151   ILE-152  3.0 2.6 -15.4 12.6 98.8 108.3 -4.3
 ILE-152   GLY-153  3.7 3.2 25.7 -51.7 24.7 28.1 -114.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-170   ASN-171  10.4 9.8 -6.4 4.5 86.8 81.6 -14.5
 ASN-171   ASN-172  13.9 13.4 -9.6 -4.0 23.3 17.8 33.3
 ASN-172   VAL-173  14.5 13.9 21.9 -57.5 127.5 134.3 128.1
 VAL-173   ALA-174  12.9 11.6 -161.2 125.9 107.0 106.7 51.1
 ALA-174   LYS-175  16.3 11.5 -113.7 109.2 38.9 96.5 81.2
 LYS-175   ALA-176  17.2 15.1 94.8 -82.4 141.0 143.3 -73.4
 ALA-176   HIS-177  16.1 16.5 143.8 -43.2 91.3 129.1 -203.3
 HIS-177   GLY-178  13.9 14.3 114.1 155.2 39.8 96.4 -136.3
 GLY-178   GLY-179  16.0 16.4 -172.9 22.7 154.5 93.5 -449.0
 GLY-179   TYR-180  14.3 15.3 156.4 -10.7 43.1 16.6 677.0
 TYR-180   SER-181  13.5 14.1 28.5 -1.7 74.0 76.7 27.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-184   GLY-185  6.4 6.6 0.7 3.1 126.6 125.6 -13.2
 GLY-185   VAL-186  4.4 4.5 10.9 -23.7 110.5 105.4 20.9
 VAL-186   GLY-187  6.0 5.8 10.2 -22.4 139.5 126.7 107.6
 GLY-187   GLU-188  5.7 6.1 -14.0 -39.6 77.6 75.6 131.7
 GLU-188   ARG-189  2.9 2.5 71.6 -2.9 165.1 150.7 -367.1
 ARG-189   THR-190  0.9 0.2 12.5 -12.0 106.8 94.3 63.6
 THR-190   ARG-191  3.9 3.4 -2.6 5.2 83.0 90.3 5.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-217   VAL-218  10.9 11.3 0.7 0.4 108.7 111.9 26.2
 VAL-218   TYR-219  10.4 10.6 19.4 -30.1 124.3 123.2 22.6
 TYR-219   GLY-220  8.5 8.6 17.3 -42.6 109.2 119.8 48.6
 GLY-220   GLN-221  8.8 8.8 -13.2 -6.5 49.3 74.7 62.7
 GLN-221   MET-222  6.8 5.8 30.6 2.5 110.2 123.2 -156.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-254   ILE-255  3.5 3.7 10.5 -12.8 126.7 133.9 -2.9
 ILE-255   ASP-256  3.1 2.7 23.8 -9.3 121.2 120.7 31.7
 ASP-256   ASN-257  1.6 1.2 6.2 -2.2 142.8 133.6 -7.0
 ASN-257   ILE-258  4.4 4.1 -10.9 -4.1 112.1 110.8 -27.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-329   ASP-330  7.4 7.2 12.1 10.8 25.6 23.1 83.6
 ASP-330   ALA-331  6.0 5.7 -13.4 18.7 80.5 80.0 -9.5
 ALA-331   THR-332  7.1 6.8 -31.8 10.1 13.4 20.0 112.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees