Glucosamine-6-Phosphate Deaminase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-4   PRO-5  10.0 10.0 -6.7 0.1 23.0 25.1 85.0
 PRO-5   LEU-6  9.9 9.9 6.9 -9.0 117.9 117.8 49.8
 LEU-6   THR-7  7.4 7.5 -8.6 14.2 30.5 33.0 -77.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-135   GLY-136  3.4 3.3 4.8 -8.2 67.8 69.9 -25.5
 GLY-136   GLY-137  6.4 6.4 -3.7 7.0 166.7 161.7 54.6
 GLY-137   VAL-138  7.8 8.0 -1.8 -6.8 92.2 87.3 -2.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-141   GLY-142  18.7 18.5 17.2 -17.0 46.3 35.6 -23.1
 GLY-142   HIS-143  16.7 16.4 -6.6 0.8 160.7 151.6 -59.1
 HIS-143   ILE-144  16.3 16.8 7.1 0.8 70.1 70.6 185.3
 ILE-144   ALA-145  13.4 14.2 4.7 -7.8 54.9 69.8 106.0
 ALA-145   PHE-146  13.3 13.9 -1.2 19.4 65.2 72.4 -33.4
 PHE-146   ASN-147  17.0 17.6 -21.1 10.8 108.8 109.3 -20.2
 ASN-147   GLU-148  18.4 18.7 58.6 -27.6 146.3 143.0 -457.4
 GLU-148   PRO-149  20.9 21.5 -5.1 -11.9 90.0 88.4 17.1
 PRO-149   ALA-150  23.1 22.1 11.9 1.1 42.2 45.5 176.7
 ALA-150   SER-151  25.3 24.1 -14.4 30.3 149.3 151.3 170.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-154   SER-155  19.9 18.8 -5.9 4.9 104.3 94.2 44.3
 SER-155   ARG-156  19.4 19.1 8.6 -18.7 68.5 71.5 60.0
 ARG-156   THR-157  17.4 17.2 -9.9 14.5 61.3 64.4 7.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-199   MET-200  6.8 6.9 0.0 -1.8 156.1 156.7 -56.1
 MET-200   ILE-201  5.2 5.4 -3.1 3.4 127.1 128.9 24.9
 ILE-201   LEU-202  6.2 6.4 -4.1 9.8 151.1 151.8 100.9
 LEU-202   VAL-203  4.2 4.4 -4.1 3.6 133.7 132.8 -5.9
 VAL-203   LEU-204  6.3 6.5 -8.2 0.5 153.3 153.2 -109.1
 LEU-204   GLY-205  5.3 5.3 2.4 7.7 46.3 49.2 112.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-233   LYS-234  14.8 14.4 -16.9 0.2 59.4 54.9 123.4
 LYS-234   ALA-235  11.9 11.8 4.5 0.7 129.3 134.3 -34.7
 ALA-235   ILE-236  10.7 10.8 -3.1 5.3 34.6 34.9 -28.7
 ILE-236   MET-237  9.2 9.4 -1.7 5.8 50.0 46.4 -53.7
 MET-237   VAL-238  8.4 8.8 -7.4 -0.6 48.4 52.5 90.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-243   THR-244  9.1 9.1 0.6 9.3 98.2 92.1 31.9
 THR-244   MET-245  11.4 11.5 0.3 4.5 42.3 45.6 70.1
 MET-245   GLU-246  13.0 13.2 -6.3 -1.5 81.3 77.9 -1.6
 GLU-246   LEU-247  16.3 16.5 -0.1 -2.1 57.8 62.1 27.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees